Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 KRT8P47-201ENST00000604727 1398 ntBASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VCPIP1Q96JH7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
VCPIP1Q96JH7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 AC092647.4-201ENST00000457211 535 ntBASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 AC112698.1-201ENST00000510299 916 ntBASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 AL355312.1-201ENST00000407115 2176 ntBASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCPIP1Q96JH7 AC009949.1-201ENST00000623048 1830 ntBASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 LINC01451-201ENST00000623792 534 ntBASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 LINC01311-201ENST00000565162 1445 ntBASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VCPIP1Q96JH7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 LINC00304-203ENST00000565008 1864 ntBASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 LINC01238-205ENST00000567549 1107 ntBASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.87■□□□□ 0.61
VCPIP1Q96JH7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCPIP1Q96JH7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VCPIP1Q96JH7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms