Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 AC073912.3-201ENST00000624414 853 ntBASIC16.13■□□□□ 0.17
PTP4A1Q93096 AC133963.1-201ENST00000504166 1679 ntBASIC16.13■□□□□ 0.17
PTP4A1Q93096 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 AC022211.2-201ENST00000585075 2527 ntBASIC16.13■□□□□ 0.17
PTP4A1Q93096 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 AL513477.1-201ENST00000602865 2407 ntBASIC16.13■□□□□ 0.17
PTP4A1Q93096 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A1Q93096 LINC01568-207ENST00000641790 1380 ntBASIC16.13■□□□□ 0.17
PTP4A1Q93096 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A1Q93096 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 LINC00602-201ENST00000629776 2065 ntBASIC16.12■□□□□ 0.17
PTP4A1Q93096 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 AC087499.1-201ENST00000418141 1075 ntBASIC16.12■□□□□ 0.17
PTP4A1Q93096 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.12■□□□□ 0.17
PTP4A1Q93096 SEC1P-202ENST00000473944 940 ntBASIC16.12■□□□□ 0.17
PTP4A1Q93096 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 KRT18P22-201ENST00000402024 1347 ntBASIC16.12■□□□□ 0.17
PTP4A1Q93096 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PTP4A1Q93096 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A1Q93096 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 INGX-201ENST00000359239 846 ntBASIC16.11■□□□□ 0.17
PTP4A1Q93096 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTP4A1Q93096 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTP4A1Q93096 AL138688.1-201ENST00000624851 1594 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms