Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHKBP1Q8TBC3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 RBM17P3-201ENST00000417687 1192 ntBASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 SLC25A1P1-201ENST00000528351 927 ntBASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 MTDHP3-201ENST00000594186 672 ntBASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 AF228730.7-201ENST00000641842 219 ntBASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHKBP1Q8TBC3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.8■□□□□ 0.6
SHKBP1Q8TBC3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 RNPS1P1-201ENST00000507437 918 ntBASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 AL049840.3-201ENST00000602669 611 ntBASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 AC243591.1-201ENST00000452967 1364 ntBASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms