Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 GMCL1P1-201ENST00000463439 1581 ntBASIC19.7■□□□□ 0.74
NFX1Q12986 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.69■□□□□ 0.74
NFX1Q12986 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NFX1Q12986 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NFX1Q12986 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.69■□□□□ 0.74
NFX1Q12986 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.69■□□□□ 0.74
NFX1Q12986 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.69■□□□□ 0.74
NFX1Q12986 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
NFX1Q12986 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 RNPS1P1-201ENST00000507437 918 ntBASIC19.69■□□□□ 0.74
NFX1Q12986 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.69■□□□□ 0.74
NFX1Q12986 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.69■□□□□ 0.74
NFX1Q12986 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.69■□□□□ 0.74
NFX1Q12986 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.69■□□□□ 0.74
NFX1Q12986 AP001269.4-201ENST00000609611 512 ntBASIC19.69■□□□□ 0.74
NFX1Q12986 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.69■□□□□ 0.74
NFX1Q12986 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NFX1Q12986 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.69■□□□□ 0.74
NFX1Q12986 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.69■□□□□ 0.74
NFX1Q12986 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NFX1Q12986 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.69■□□□□ 0.74
NFX1Q12986 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NFX1Q12986 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.69■□□□□ 0.74
NFX1Q12986 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NFX1Q12986 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NFX1Q12986 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NFX1Q12986 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
NFX1Q12986 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.68■□□□□ 0.74
NFX1Q12986 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
NFX1Q12986 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.68■□□□□ 0.74
NFX1Q12986 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.68■□□□□ 0.74
NFX1Q12986 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
NFX1Q12986 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.68■□□□□ 0.74
NFX1Q12986 AC093909.1-201ENST00000504731 1122 ntBASIC19.68■□□□□ 0.74
NFX1Q12986 AC073648.2-201ENST00000510116 352 ntBASIC19.68■□□□□ 0.74
NFX1Q12986 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.68■□□□□ 0.74
NFX1Q12986 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.68■□□□□ 0.74
NFX1Q12986 AC011467.2-201ENST00000598425 242 ntBASIC19.68■□□□□ 0.74
NFX1Q12986 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.68■□□□□ 0.74
NFX1Q12986 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.68■□□□□ 0.74
NFX1Q12986 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.68■□□□□ 0.74
NFX1Q12986 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.68■□□□□ 0.74
NFX1Q12986 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NFX1Q12986 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.68■□□□□ 0.74
NFX1Q12986 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NFX1Q12986 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.68■□□□□ 0.74
NFX1Q12986 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.67■□□□□ 0.74
NFX1Q12986 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 AC126763.1-201ENST00000552015 2118 ntBASIC19.67■□□□□ 0.74
NFX1Q12986 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.67■□□□□ 0.74
NFX1Q12986 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 RBM17P3-201ENST00000417687 1192 ntBASIC19.67■□□□□ 0.74
NFX1Q12986 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.67■□□□□ 0.74
NFX1Q12986 FGFR3P6-201ENST00000457012 610 ntBASIC19.67■□□□□ 0.74
NFX1Q12986 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.67■□□□□ 0.74
NFX1Q12986 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.67■□□□□ 0.74
NFX1Q12986 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 AC112698.1-201ENST00000510299 916 ntBASIC19.67■□□□□ 0.74
NFX1Q12986 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.67■□□□□ 0.74
NFX1Q12986 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.67■□□□□ 0.74
NFX1Q12986 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.67■□□□□ 0.74
NFX1Q12986 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.67■□□□□ 0.74
NFX1Q12986 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.67■□□□□ 0.74
NFX1Q12986 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.67■□□□□ 0.74
NFX1Q12986 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.67■□□□□ 0.74
NFX1Q12986 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NFX1Q12986 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NFX1Q12986 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms