Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SKP1P63208 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.04■□□□□ 0.32
SKP1P63208 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.04■□□□□ 0.32
SKP1P63208 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.04■□□□□ 0.32
SKP1P63208 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.03■□□□□ 0.32
SKP1P63208 AC104581.1-202ENST00000635932 2618 ntBASIC17.03■□□□□ 0.32
SKP1P63208 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.03■□□□□ 0.32
SKP1P63208 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.03■□□□□ 0.32
SKP1P63208 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
SKP1P63208 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 MTCL1P1-201ENST00000446207 792 ntBASIC17.03■□□□□ 0.32
SKP1P63208 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.03■□□□□ 0.32
SKP1P63208 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.03■□□□□ 0.32
SKP1P63208 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.03■□□□□ 0.32
SKP1P63208 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SKP1P63208 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.03■□□□□ 0.32
SKP1P63208 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SKP1P63208 AC132938.6-201ENST00000623828 1655 ntBASIC17.03■□□□□ 0.32
SKP1P63208 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.02■□□□□ 0.32
SKP1P63208 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 REXO1L9P-201ENST00000604264 2108 ntBASIC17.02■□□□□ 0.32
SKP1P63208 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 HCG4P8-203ENST00000443049 980 ntBASIC17.02■□□□□ 0.32
SKP1P63208 AC068472.1-201ENST00000474589 881 ntBASIC17.02■□□□□ 0.32
SKP1P63208 AC112698.1-201ENST00000510299 916 ntBASIC17.02■□□□□ 0.32
SKP1P63208 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.02■□□□□ 0.32
SKP1P63208 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SKP1P63208 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SKP1P63208 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SKP1P63208 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SKP1P63208 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SKP1P63208 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SKP1P63208 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SKP1P63208 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
SKP1P63208 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.02■□□□□ 0.31
SKP1P63208 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SKP1P63208 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.02■□□□□ 0.31
SKP1P63208 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 OR6D1P-203ENST00000641209 4860 ntBASIC17.01■□□□□ 0.31
SKP1P63208 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.01■□□□□ 0.31
SKP1P63208 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.01■□□□□ 0.31
SKP1P63208 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.01■□□□□ 0.31
SKP1P63208 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.01■□□□□ 0.31
SKP1P63208 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.01■□□□□ 0.31
SKP1P63208 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.01■□□□□ 0.31
SKP1P63208 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.01■□□□□ 0.31
SKP1P63208 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.01■□□□□ 0.31
SKP1P63208 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.01■□□□□ 0.31
SKP1P63208 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SKP1P63208 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.01■□□□□ 0.31
SKP1P63208 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 NPAP1P7-201ENST00000613027 823 ntBASIC17.01■□□□□ 0.31
SKP1P63208 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SKP1P63208 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SKP1P63208 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SKP1P63208 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SKP1P63208 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms