Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 PMS2P4-201ENST00000412466 1052 ntBASIC31.61■■■□□ 2.65
SMARCA2P51531 FAM86GP-201ENST00000448322 971 ntBASIC31.61■■■□□ 2.65
SMARCA2P51531 SIGLEC30P-201ENST00000455569 941 ntBASIC31.61■■■□□ 2.65
SMARCA2P51531 AC004449.1-201ENST00000564240 433 ntBASIC31.61■■■□□ 2.65
SMARCA2P51531 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
SMARCA2P51531 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCA2P51531 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
SMARCA2P51531 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC31.61■■■□□ 2.65
SMARCA2P51531 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMARCA2P51531 AL121761.2-201ENST00000598007 1648 ntBASIC31.61■■■□□ 2.65
SMARCA2P51531 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC31.6■■■□□ 2.65
SMARCA2P51531 AL353135.1-201ENST00000606729 504 ntBASIC31.6■■■□□ 2.65
SMARCA2P51531 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA2P51531 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA2P51531 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA2P51531 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA2P51531 GMCL1P1-201ENST00000463439 1581 ntBASIC31.6■■■□□ 2.65
SMARCA2P51531 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC31.6■■■□□ 2.65
SMARCA2P51531 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA2P51531 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA2P51531 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA2P51531 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA2P51531 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA2P51531 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
SMARCA2P51531 AC190387.1-201ENST00000551683 408 ntBASIC31.6■■■□□ 2.65
SMARCA2P51531 AC007064.4-201ENST00000637740 555 ntBASIC31.6■■■□□ 2.65
SMARCA2P51531 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA2P51531 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
SMARCA2P51531 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC31.59■■■□□ 2.65
SMARCA2P51531 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA2P51531 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA2P51531 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA2P51531 NEK7-201ENST00000367383 586 ntTSL 2 BASIC31.59■■■□□ 2.65
SMARCA2P51531 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
SMARCA2P51531 DDT-204ENST00000404092 805 ntTSL 3 BASIC31.59■■■□□ 2.65
SMARCA2P51531 DAD1-205ENST00000543337 501 ntTSL 3 BASIC31.59■■■□□ 2.65
SMARCA2P51531 AC025678.2-201ENST00000562061 970 ntBASIC31.59■■■□□ 2.65
SMARCA2P51531 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA2P51531 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC31.59■■■□□ 2.65
SMARCA2P51531 MED16-214ENST00000617672 554 ntTSL 5 BASIC31.59■■■□□ 2.65
SMARCA2P51531 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA2P51531 AL035252.4-201ENST00000624174 288 ntBASIC31.59■■■□□ 2.65
SMARCA2P51531 LINC00628-201ENST00000628516 1289 ntBASIC31.59■■■□□ 2.65
SMARCA2P51531 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC31.59■■■□□ 2.65
SMARCA2P51531 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA2P51531 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
SMARCA2P51531 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA2P51531 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA2P51531 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC31.58■■■□□ 2.65
SMARCA2P51531 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA2P51531 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA2P51531 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC31.58■■■□□ 2.65
SMARCA2P51531 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC31.58■■■□□ 2.65
SMARCA2P51531 AC087641.1-201ENST00000557561 1021 ntBASIC31.58■■■□□ 2.65
SMARCA2P51531 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC31.58■■■□□ 2.65
SMARCA2P51531 IGHV3OR16-6-201ENST00000568775 360 ntBASIC31.58■■■□□ 2.65
SMARCA2P51531 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC31.58■■■□□ 2.65
SMARCA2P51531 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
SMARCA2P51531 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA2P51531 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC31.58■■■□□ 2.65
SMARCA2P51531 AF228730.6-201ENST00000641497 218 ntBASIC31.58■■■□□ 2.65
SMARCA2P51531 AC084121.3-201ENST00000641716 218 ntBASIC31.58■■■□□ 2.65
SMARCA2P51531 AC105233.6-201ENST00000642093 218 ntBASIC31.58■■■□□ 2.65
SMARCA2P51531 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA2P51531 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
SMARCA2P51531 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCA2P51531 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC31.57■■■□□ 2.64
SMARCA2P51531 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCA2P51531 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
SMARCA2P51531 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC31.57■■■□□ 2.64
SMARCA2P51531 AC093520.2-201ENST00000561830 333 ntBASIC31.57■■■□□ 2.64
SMARCA2P51531 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC31.57■■■□□ 2.64
SMARCA2P51531 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC31.57■■■□□ 2.64
SMARCA2P51531 REXO1L3P-201ENST00000622202 1288 ntBASIC31.57■■■□□ 2.64
SMARCA2P51531 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC31.57■■■□□ 2.64
SMARCA2P51531 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCA2P51531 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
SMARCA2P51531 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC31.57■■■□□ 2.64
SMARCA2P51531 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCA2P51531 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCA2P51531 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCA2P51531 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC31.57■■■□□ 2.64
SMARCA2P51531 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
SMARCA2P51531 AL627223.1-201ENST00000416693 442 ntBASIC31.56■■■□□ 2.64
SMARCA2P51531 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC31.56■■■□□ 2.64
SMARCA2P51531 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA2P51531 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC31.56■■■□□ 2.64
SMARCA2P51531 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA2P51531 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC31.56■■■□□ 2.64
SMARCA2P51531 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC31.56■■■□□ 2.64
SMARCA2P51531 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA2P51531 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA2P51531 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC31.56■■■□□ 2.64
SMARCA2P51531 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
SMARCA2P51531 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
SMARCA2P51531 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC31.56■■■□□ 2.64
SMARCA2P51531 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA2P51531 PTCHD3P3-201ENST00000403073 906 ntBASIC31.56■■■□□ 2.64
SMARCA2P51531 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA2P51531 AC067863.1-201ENST00000494933 530 ntBASIC31.56■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms