Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CSNK1EP49674 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1EP49674 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1EP49674 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CSNK1EP49674 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CSNK1EP49674 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.51■□□□□ 0.39
CSNK1EP49674 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1EP49674 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.51■□□□□ 0.39
CSNK1EP49674 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1EP49674 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.51■□□□□ 0.39
CSNK1EP49674 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1EP49674 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1EP49674 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 AC122714.2-201ENST00000502787 707 ntBASIC17.51■□□□□ 0.39
CSNK1EP49674 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.51■□□□□ 0.39
CSNK1EP49674 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.51■□□□□ 0.39
CSNK1EP49674 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 AD001527.2-201ENST00000622994 785 ntBASIC17.51■□□□□ 0.39
CSNK1EP49674 AC005593.1-201ENST00000624894 515 ntBASIC17.51■□□□□ 0.39
CSNK1EP49674 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1EP49674 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1EP49674 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CSNK1EP49674 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.5■□□□□ 0.39
CSNK1EP49674 KRT18P27-201ENST00000427733 1299 ntBASIC17.5■□□□□ 0.39
CSNK1EP49674 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.5■□□□□ 0.39
CSNK1EP49674 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1EP49674 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1EP49674 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 AC002347.1-201ENST00000569543 541 ntBASIC17.5■□□□□ 0.39
CSNK1EP49674 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1EP49674 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.5■□□□□ 0.39
CSNK1EP49674 AC006557.2-201ENST00000592985 1240 ntBASIC17.5■□□□□ 0.39
CSNK1EP49674 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CSNK1EP49674 AC073592.4-201ENST00000623827 446 ntBASIC17.5■□□□□ 0.39
CSNK1EP49674 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1EP49674 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.5■□□□□ 0.39
CSNK1EP49674 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CSNK1EP49674 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1EP49674 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.49■□□□□ 0.39
CSNK1EP49674 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1EP49674 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1EP49674 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 AC073621.1-201ENST00000392730 636 ntBASIC17.49■□□□□ 0.39
CSNK1EP49674 AC004832.2-201ENST00000426397 482 ntBASIC17.49■□□□□ 0.39
CSNK1EP49674 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.49■□□□□ 0.39
CSNK1EP49674 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CSNK1EP49674 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.49■□□□□ 0.39
CSNK1EP49674 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1EP49674 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1EP49674 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.49■□□□□ 0.39
CSNK1EP49674 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1EP49674 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1EP49674 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.49■□□□□ 0.39
CSNK1EP49674 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CSNK1EP49674 AC134684.3-201ENST00000641758 218 ntBASIC17.49■□□□□ 0.39
CSNK1EP49674 AC079781.4-201ENST00000641908 219 ntBASIC17.49■□□□□ 0.39
CSNK1EP49674 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CSNK1EP49674 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CSNK1EP49674 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1EP49674 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms