Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.46■□□□□ 0.23
SHC1P29353 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHC1P29353 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHC1P29353 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.46■□□□□ 0.23
SHC1P29353 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.46■□□□□ 0.23
SHC1P29353 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.46■□□□□ 0.23
SHC1P29353 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.46■□□□□ 0.23
SHC1P29353 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SHC1P29353 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.46■□□□□ 0.23
SHC1P29353 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SHC1P29353 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SHC1P29353 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.46■□□□□ 0.23
SHC1P29353 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHC1P29353 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.46■□□□□ 0.23
SHC1P29353 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.46■□□□□ 0.23
SHC1P29353 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SHC1P29353 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHC1P29353 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHC1P29353 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SHC1P29353 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.45■□□□□ 0.22
SHC1P29353 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 AC106820.2-201ENST00000563775 3264 ntBASIC16.45■□□□□ 0.22
SHC1P29353 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.45■□□□□ 0.22
SHC1P29353 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SHC1P29353 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 FAM86EP-206ENST00000510506 987 ntBASIC16.45■□□□□ 0.22
SHC1P29353 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.45■□□□□ 0.22
SHC1P29353 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.45■□□□□ 0.22
SHC1P29353 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.45■□□□□ 0.22
SHC1P29353 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SHC1P29353 GMCL1P1-201ENST00000463439 1581 ntBASIC16.45■□□□□ 0.22
SHC1P29353 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.45■□□□□ 0.22
SHC1P29353 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SHC1P29353 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
SHC1P29353 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.45■□□□□ 0.22
SHC1P29353 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.45■□□□□ 0.22
SHC1P29353 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC1P29353 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
SHC1P29353 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SHC1P29353 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.44■□□□□ 0.22
SHC1P29353 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.44■□□□□ 0.22
SHC1P29353 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SHC1P29353 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 AL121956.5-201ENST00000625261 221 ntBASIC16.44■□□□□ 0.22
SHC1P29353 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.44■□□□□ 0.22
SHC1P29353 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SHC1P29353 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC1P29353 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC1P29353 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms