Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.42■□□□□ 0.54
VCANP13611 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.42■□□□□ 0.54
VCANP13611 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.42■□□□□ 0.54
VCANP13611 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VCANP13611 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.42■□□□□ 0.54
VCANP13611 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCANP13611 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
VCANP13611 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.42■□□□□ 0.54
VCANP13611 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCANP13611 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
VCANP13611 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCANP13611 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.42■□□□□ 0.54
VCANP13611 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.42■□□□□ 0.54
VCANP13611 AC068587.10-201ENST00000641210 219 ntBASIC18.42■□□□□ 0.54
VCANP13611 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.42■□□□□ 0.54
VCANP13611 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCANP13611 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VCANP13611 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.42■□□□□ 0.54
VCANP13611 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.42■□□□□ 0.54
VCANP13611 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.42■□□□□ 0.54
VCANP13611 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCANP13611 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.42■□□□□ 0.54
VCANP13611 REXO1L3P-201ENST00000622202 1288 ntBASIC18.42■□□□□ 0.54
VCANP13611 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
VCANP13611 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCANP13611 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.42■□□□□ 0.54
VCANP13611 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
VCANP13611 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VCANP13611 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.41■□□□□ 0.54
VCANP13611 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VCANP13611 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.41■□□□□ 0.54
VCANP13611 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.41■□□□□ 0.54
VCANP13611 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.41■□□□□ 0.54
VCANP13611 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.41■□□□□ 0.54
VCANP13611 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 SLC25A39P2-201ENST00000537614 270 ntBASIC18.41■□□□□ 0.54
VCANP13611 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
VCANP13611 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VCANP13611 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VCANP13611 KRT17P7-201ENST00000451704 1104 ntBASIC18.41■□□□□ 0.54
VCANP13611 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.41■□□□□ 0.54
VCANP13611 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCANP13611 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.4■□□□□ 0.54
VCANP13611 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.4■□□□□ 0.54
VCANP13611 AC099778.1-201ENST00000568593 1911 ntBASIC18.4■□□□□ 0.54
VCANP13611 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VCANP13611 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
VCANP13611 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 AC074386.1-202ENST00000463561 864 ntBASIC18.4■□□□□ 0.54
VCANP13611 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.4■□□□□ 0.54
VCANP13611 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.4■□□□□ 0.54
VCANP13611 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 AL499627.1-201ENST00000569373 2188 ntBASIC18.4■□□□□ 0.54
VCANP13611 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
VCANP13611 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
VCANP13611 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.4■□□□□ 0.54
VCANP13611 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.4■□□□□ 0.54
VCANP13611 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCANP13611 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.4■□□□□ 0.54
VCANP13611 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VCANP13611 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VCANP13611 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
VCANP13611 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
VCANP13611 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
VCANP13611 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.39■□□□□ 0.54
VCANP13611 AC008687.5-201ENST00000593746 558 ntBASIC18.39■□□□□ 0.54
VCANP13611 KRT8P32-201ENST00000512863 1461 ntBASIC18.39■□□□□ 0.53
VCANP13611 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCANP13611 TIMM8BP1-201ENST00000452384 211 ntBASIC18.39■□□□□ 0.53
VCANP13611 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.39■□□□□ 0.53
VCANP13611 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.39■□□□□ 0.53
VCANP13611 AC009154.2-201ENST00000621177 724 ntBASIC18.39■□□□□ 0.53
VCANP13611 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.39■□□□□ 0.53
VCANP13611 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCANP13611 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VCANP13611 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.39■□□□□ 0.53
VCANP13611 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCANP13611 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCANP13611 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms