Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BMP3P12645 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
BMP3P12645 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.64■□□□□ 0.89
BMP3P12645 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.64■□□□□ 0.89
BMP3P12645 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.64■□□□□ 0.89
BMP3P12645 AL590627.1-203ENST00000421194 1026 ntBASIC20.64■□□□□ 0.89
BMP3P12645 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.64■□□□□ 0.89
BMP3P12645 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 AC021087.4-201ENST00000563761 564 ntBASIC20.64■□□□□ 0.89
BMP3P12645 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.64■□□□□ 0.89
BMP3P12645 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
BMP3P12645 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
BMP3P12645 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BMP3P12645 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.63■□□□□ 0.89
BMP3P12645 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.63■□□□□ 0.89
BMP3P12645 HNRNPDP1-201ENST00000439535 754 ntBASIC20.63■□□□□ 0.89
BMP3P12645 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.63■□□□□ 0.89
BMP3P12645 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.63■□□□□ 0.89
BMP3P12645 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
BMP3P12645 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.63■□□□□ 0.89
BMP3P12645 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.63■□□□□ 0.89
BMP3P12645 AC120114.3-201ENST00000611923 658 ntBASIC20.63■□□□□ 0.89
BMP3P12645 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.63■□□□□ 0.89
BMP3P12645 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BMP3P12645 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.63■□□□□ 0.89
BMP3P12645 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.63■□□□□ 0.89
BMP3P12645 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.63■□□□□ 0.89
BMP3P12645 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BMP3P12645 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BMP3P12645 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
BMP3P12645 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.62■□□□□ 0.89
BMP3P12645 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
BMP3P12645 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BMP3P12645 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BMP3P12645 COX5BP2-201ENST00000392354 334 ntBASIC20.62■□□□□ 0.89
BMP3P12645 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BMP3P12645 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.62■□□□□ 0.89
BMP3P12645 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BMP3P12645 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.62■□□□□ 0.89
BMP3P12645 AL049840.3-201ENST00000602669 611 ntBASIC20.62■□□□□ 0.89
BMP3P12645 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.62■□□□□ 0.89
BMP3P12645 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.62■□□□□ 0.89
BMP3P12645 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BMP3P12645 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BMP3P12645 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.62■□□□□ 0.89
BMP3P12645 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BMP3P12645 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.62■□□□□ 0.89
BMP3P12645 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.62■□□□□ 0.89
BMP3P12645 REXO1L9P-201ENST00000604264 2108 ntBASIC20.62■□□□□ 0.89
BMP3P12645 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BMP3P12645 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.61■□□□□ 0.89
BMP3P12645 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP3P12645 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP3P12645 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.61■□□□□ 0.89
BMP3P12645 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BMP3P12645 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
BMP3P12645 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP3P12645 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
BMP3P12645 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.61■□□□□ 0.89
BMP3P12645 IL9RP2-201ENST00000423948 1312 ntBASIC20.61■□□□□ 0.89
BMP3P12645 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BMP3P12645 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP3P12645 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP3P12645 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.61■□□□□ 0.89
BMP3P12645 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BMP3P12645 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.61■□□□□ 0.89
BMP3P12645 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP3P12645 AC093909.1-201ENST00000504731 1122 ntBASIC20.61■□□□□ 0.89
BMP3P12645 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.61■□□□□ 0.89
BMP3P12645 NKAPP1-205ENST00000585790 367 ntBASIC20.61■□□□□ 0.89
BMP3P12645 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.61■□□□□ 0.89
BMP3P12645 AL139288.1-201ENST00000623748 933 ntBASIC20.61■□□□□ 0.89
BMP3P12645 FAM215A-202ENST00000632077 792 ntBASIC20.61■□□□□ 0.89
BMP3P12645 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
BMP3P12645 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
BMP3P12645 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
BMP3P12645 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BMP3P12645 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BMP3P12645 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.61■□□□□ 0.89
BMP3P12645 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms