Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC31.15■■■□□ 2.58
TOP2AP11388 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TOP2AP11388 AP000344.2-201ENST00000512987 629 ntBASIC31.15■■■□□ 2.58
TOP2AP11388 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC31.15■■■□□ 2.58
TOP2AP11388 AL031432.2-201ENST00000566714 459 ntBASIC31.15■■■□□ 2.58
TOP2AP11388 AL928711.1-201ENST00000570165 459 ntBASIC31.15■■■□□ 2.58
TOP2AP11388 CITED2-204ENST00000618718 901 ntTSL 2 BASIC31.15■■■□□ 2.58
TOP2AP11388 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
TOP2AP11388 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TOP2AP11388 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TOP2AP11388 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TOP2AP11388 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
TOP2AP11388 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC31.14■■■□□ 2.58
TOP2AP11388 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TOP2AP11388 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
TOP2AP11388 DDX43P3-201ENST00000441064 443 ntBASIC31.14■■■□□ 2.58
TOP2AP11388 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TOP2AP11388 SIGLEC30P-201ENST00000455569 941 ntBASIC31.14■■■□□ 2.58
TOP2AP11388 CD63-210ENST00000550776 870 ntTSL 5 BASIC31.14■■■□□ 2.58
TOP2AP11388 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC31.14■■■□□ 2.58
TOP2AP11388 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC31.14■■■□□ 2.58
TOP2AP11388 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC31.14■■■□□ 2.58
TOP2AP11388 AC100803.2-201ENST00000562459 1963 ntBASIC31.14■■■□□ 2.58
TOP2AP11388 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC31.14■■■□□ 2.58
TOP2AP11388 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
TOP2AP11388 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
TOP2AP11388 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TOP2AP11388 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
TOP2AP11388 PC-208ENST00000529047 1607 ntTSL 3 BASIC31.14■■■□□ 2.58
TOP2AP11388 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.58
TOP2AP11388 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
TOP2AP11388 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC31.14■■■□□ 2.57
TOP2AP11388 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
TOP2AP11388 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
TOP2AP11388 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
TOP2AP11388 CD82-202ENST00000342935 967 ntTSL 5 BASIC31.13■■■□□ 2.57
TOP2AP11388 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TOP2AP11388 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
TOP2AP11388 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
TOP2AP11388 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TOP2AP11388 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
TOP2AP11388 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TOP2AP11388 AC109462.3-201ENST00000573934 613 ntBASIC31.13■■■□□ 2.57
TOP2AP11388 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
TOP2AP11388 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TOP2AP11388 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TOP2AP11388 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TOP2AP11388 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC31.12■■■□□ 2.57
TOP2AP11388 GOLGA6L17P-202ENST00000614358 1398 ntBASIC31.12■■■□□ 2.57
TOP2AP11388 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TOP2AP11388 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TOP2AP11388 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC31.12■■■□□ 2.57
TOP2AP11388 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TOP2AP11388 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TOP2AP11388 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TOP2AP11388 HARS-201ENST00000307633 1780 ntTSL 2 BASIC31.11■■■□□ 2.57
TOP2AP11388 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TOP2AP11388 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC31.11■■■□□ 2.57
TOP2AP11388 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
TOP2AP11388 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TOP2AP11388 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TOP2AP11388 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC31.11■■■□□ 2.57
TOP2AP11388 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC31.11■■■□□ 2.57
TOP2AP11388 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC31.11■■■□□ 2.57
TOP2AP11388 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC31.11■■■□□ 2.57
TOP2AP11388 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC31.11■■■□□ 2.57
TOP2AP11388 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC31.11■■■□□ 2.57
TOP2AP11388 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC31.11■■■□□ 2.57
TOP2AP11388 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
TOP2AP11388 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TOP2AP11388 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
TOP2AP11388 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
TOP2AP11388 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TOP2AP11388 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TOP2AP11388 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC31.1■■■□□ 2.57
TOP2AP11388 SNHG9-202ENST00000564014 471 ntBASIC31.1■■■□□ 2.57
TOP2AP11388 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
TOP2AP11388 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
TOP2AP11388 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC31.1■■■□□ 2.57
TOP2AP11388 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC31.1■■■□□ 2.57
TOP2AP11388 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TOP2AP11388 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC31.1■■■□□ 2.57
TOP2AP11388 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC31.1■■■□□ 2.57
TOP2AP11388 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TOP2AP11388 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TOP2AP11388 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TOP2AP11388 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TOP2AP11388 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TOP2AP11388 AL096828.2-201ENST00000567259 1965 ntBASIC31.09■■■□□ 2.57
TOP2AP11388 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TOP2AP11388 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms