Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AC004967.1-201ENST00000453589 447 ntBASIC17.58■□□□□ 0.4
TAF4O00268 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.58■□□□□ 0.4
TAF4O00268 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.58■□□□□ 0.4
TAF4O00268 SART3-203ENST00000546611 1184 ntBASIC17.58■□□□□ 0.4
TAF4O00268 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.58■□□□□ 0.4
TAF4O00268 MIR3180-5-201ENST00000583743 153 ntBASIC17.58■□□□□ 0.4
TAF4O00268 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.58■□□□□ 0.4
TAF4O00268 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 AC027601.4-201ENST00000611259 610 ntBASIC17.58■□□□□ 0.4
TAF4O00268 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TAF4O00268 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TAF4O00268 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.58■□□□□ 0.4
TAF4O00268 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TAF4O00268 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
TAF4O00268 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TAF4O00268 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TAF4O00268 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.57■□□□□ 0.4
TAF4O00268 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
TAF4O00268 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.57■□□□□ 0.4
TAF4O00268 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.57■□□□□ 0.4
TAF4O00268 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.57■□□□□ 0.4
TAF4O00268 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.57■□□□□ 0.4
TAF4O00268 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.57■□□□□ 0.4
TAF4O00268 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.57■□□□□ 0.4
TAF4O00268 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.57■□□□□ 0.4
TAF4O00268 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.57■□□□□ 0.4
TAF4O00268 AC145285.3-201ENST00000564603 959 ntBASIC17.57■□□□□ 0.4
TAF4O00268 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 AC134684.3-201ENST00000641758 218 ntBASIC17.57■□□□□ 0.4
TAF4O00268 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.57■□□□□ 0.4
TAF4O00268 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.57■□□□□ 0.4
TAF4O00268 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TAF4O00268 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TAF4O00268 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TAF4O00268 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TAF4O00268 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 YBX2P1-201ENST00000394192 760 ntBASIC17.56■□□□□ 0.4
TAF4O00268 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.56■□□□□ 0.4
TAF4O00268 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.56■□□□□ 0.4
TAF4O00268 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.56■□□□□ 0.4
TAF4O00268 MIR5100-201ENST00000579544 119 ntBASIC17.56■□□□□ 0.4
TAF4O00268 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.56■□□□□ 0.4
TAF4O00268 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TAF4O00268 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.56■□□□□ 0.4
TAF4O00268 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.56■□□□□ 0.4
TAF4O00268 AL591684.3-201ENST00000605187 298 ntBASIC17.56■□□□□ 0.4
TAF4O00268 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TAF4O00268 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.56■□□□□ 0.4
TAF4O00268 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TAF4O00268 AC104109.2-201ENST00000602919 1418 ntBASIC17.55■□□□□ 0.4
TAF4O00268 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.55■□□□□ 0.4
TAF4O00268 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms