Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TCRBV7S3A2A0A539 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 KRT18P22-201ENST00000402024 1347 ntBASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 AC022898.2-201ENST00000616822 1312 ntBASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 PRORSD1P-202ENST00000563365 2154 ntBASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 AP001094.4-201ENST00000579008 2176 ntBASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 AL023806.1-201ENST00000603994 1649 ntBASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 KRT8P47-201ENST00000604727 1398 ntBASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TCRBV7S3A2A0A539 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 AC010203.1-204ENST00000548782 407 ntBASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 AC145285.6-201ENST00000604632 637 ntBASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TCRBV7S3A2A0A539 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 AP000523.1-201ENST00000398242 1049 ntBASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 AC113404.2-201ENST00000507884 177 ntBASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.22■□□□□ 0.51
TCRBV7S3A2A0A539 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms