Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTA1Q9NP79 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.02■□□□□ 0.8
VTA1Q9NP79 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTA1Q9NP79 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTA1Q9NP79 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VTA1Q9NP79 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
VTA1Q9NP79 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.02■□□□□ 0.79
VTA1Q9NP79 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VTA1Q9NP79 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
VTA1Q9NP79 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.02■□□□□ 0.79
VTA1Q9NP79 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.01■□□□□ 0.79
VTA1Q9NP79 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 MIR1199-201ENST00000621445 119 ntBASIC20.01■□□□□ 0.79
VTA1Q9NP79 PGM5P2-202ENST00000637225 1043 ntBASIC20.01■□□□□ 0.79
VTA1Q9NP79 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.01■□□□□ 0.79
VTA1Q9NP79 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTA1Q9NP79 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20■□□□□ 0.79
VTA1Q9NP79 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VTA1Q9NP79 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20■□□□□ 0.79
VTA1Q9NP79 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VTA1Q9NP79 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VTA1Q9NP79 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20■□□□□ 0.79
VTA1Q9NP79 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20■□□□□ 0.79
VTA1Q9NP79 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20■□□□□ 0.79
VTA1Q9NP79 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20■□□□□ 0.79
VTA1Q9NP79 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
VTA1Q9NP79 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20■□□□□ 0.79
VTA1Q9NP79 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20■□□□□ 0.79
VTA1Q9NP79 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20■□□□□ 0.79
VTA1Q9NP79 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20■□□□□ 0.79
VTA1Q9NP79 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20■□□□□ 0.79
VTA1Q9NP79 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20■□□□□ 0.79
VTA1Q9NP79 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20■□□□□ 0.79
VTA1Q9NP79 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
VTA1Q9NP79 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20■□□□□ 0.79
VTA1Q9NP79 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
VTA1Q9NP79 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTA1Q9NP79 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VTA1Q9NP79 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VTA1Q9NP79 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 AC009947.1-201ENST00000444350 727 ntBASIC19.99■□□□□ 0.79
VTA1Q9NP79 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.99■□□□□ 0.79
VTA1Q9NP79 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VTA1Q9NP79 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VTA1Q9NP79 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTA1Q9NP79 AL353593.2-201ENST00000602529 1483 ntBASIC19.99■□□□□ 0.79
VTA1Q9NP79 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.98■□□□□ 0.79
VTA1Q9NP79 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTA1Q9NP79 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTA1Q9NP79 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VTA1Q9NP79 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTA1Q9NP79 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.98■□□□□ 0.79
VTA1Q9NP79 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTA1Q9NP79 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTA1Q9NP79 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTA1Q9NP79 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VTA1Q9NP79 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.98■□□□□ 0.79
VTA1Q9NP79 AC073621.1-201ENST00000392730 636 ntBASIC19.98■□□□□ 0.79
VTA1Q9NP79 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.98■□□□□ 0.79
VTA1Q9NP79 RNA5SP416-201ENST00000516838 111 ntBASIC19.98■□□□□ 0.79
VTA1Q9NP79 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms