Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CRNKL1Q9BZJ0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CRNKL1Q9BZJ0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CRNKL1Q9BZJ0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CRNKL1Q9BZJ0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CRNKL1Q9BZJ0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CRNKL1Q9BZJ0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CRNKL1Q9BZJ0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CRNKL1Q9BZJ0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CRNKL1Q9BZJ0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 FDX1P1-201ENST00000449115 551 ntBASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 AC009078.2-202ENST00000463353 338 ntBASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 AP002469.2-201ENST00000531724 424 ntBASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.31■■□□□ 1
CRNKL1Q9BZJ0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 AC020763.4-201ENST00000623414 4170 ntBASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRNKL1Q9BZJ0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 RBM17P3-201ENST00000417687 1192 ntBASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 AC008608.2-201ENST00000606089 416 ntBASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 AP001269.4-201ENST00000609611 512 ntBASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.29■■□□□ 1
CRNKL1Q9BZJ0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CRNKL1Q9BZJ0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.28■■□□□ 1
CRNKL1Q9BZJ0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CRNKL1Q9BZJ0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CRNKL1Q9BZJ0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CRNKL1Q9BZJ0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.28■■□□□ 1
CRNKL1Q9BZJ0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CRNKL1Q9BZJ0 AC010460.3-201ENST00000511359 1579 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms