Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 LINC01225-203ENST00000563550 1244 ntBASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 MIR6775-201ENST00000617557 69 ntBASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL25A1Q9BXS0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL25A1Q9BXS0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL25A1Q9BXS0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL25A1Q9BXS0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL25A1Q9BXS0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL25A1Q9BXS0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL25A1Q9BXS0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL25A1Q9BXS0 MIR1908-201ENST00000410394 80 ntBASIC18■□□□□ 0.47
COL25A1Q9BXS0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 AL513480.1-201ENST00000451731 511 ntBASIC18■□□□□ 0.47
COL25A1Q9BXS0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL25A1Q9BXS0 AL139099.5-201ENST00000635274 300 ntBASIC18■□□□□ 0.47
COL25A1Q9BXS0 AC148477.5-201ENST00000625164 1645 ntBASIC18■□□□□ 0.47
COL25A1Q9BXS0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18■□□□□ 0.47
COL25A1Q9BXS0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL25A1Q9BXS0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 GNAS-203ENST00000306120 1878 ntBASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 MYCLP1-201ENST00000372451 1075 ntBASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 SPCS2P4-201ENST00000436160 681 ntBASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 AC122714.2-201ENST00000502787 707 ntBASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 AL135744.1-201ENST00000565098 629 ntBASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL25A1Q9BXS0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 MIR149-201ENST00000384879 89 ntBASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 MIR663B-201ENST00000408361 115 ntBASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 AC099548.2-209ENST00000480264 625 ntBASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 AC073592.8-201ENST00000624126 511 ntBASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.98■□□□□ 0.47
COL25A1Q9BXS0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms