Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
MUC4Q99102 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.13□□□□□ -0.31
MUC4Q99102 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.13□□□□□ -0.31
MUC4Q99102 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.13□□□□□ -0.31
MUC4Q99102 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 INGX-201ENST00000359239 846 ntBASIC13.13□□□□□ -0.31
MUC4Q99102 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MUC4Q99102 SLC25A3P1-201ENST00000443844 931 ntBASIC13.13□□□□□ -0.31
MUC4Q99102 AC104390.1-201ENST00000555663 520 ntBASIC13.13□□□□□ -0.31
MUC4Q99102 NEK4P2-201ENST00000580004 1012 ntBASIC13.13□□□□□ -0.31
MUC4Q99102 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.13□□□□□ -0.31
MUC4Q99102 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.13□□□□□ -0.31
MUC4Q99102 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MUC4Q99102 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.13□□□□□ -0.31
MUC4Q99102 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.13□□□□□ -0.31
MUC4Q99102 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MUC4Q99102 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.13□□□□□ -0.31
MUC4Q99102 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.13□□□□□ -0.31
MUC4Q99102 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.13□□□□□ -0.31
MUC4Q99102 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MUC4Q99102 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.12□□□□□ -0.31
MUC4Q99102 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.12□□□□□ -0.31
MUC4Q99102 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
MUC4Q99102 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.12□□□□□ -0.31
MUC4Q99102 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
MUC4Q99102 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 AL450487.1-201ENST00000426799 995 ntBASIC13.12□□□□□ -0.31
MUC4Q99102 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.12□□□□□ -0.31
MUC4Q99102 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.12□□□□□ -0.31
MUC4Q99102 EGLN1P1-201ENST00000531623 762 ntBASIC13.12□□□□□ -0.31
MUC4Q99102 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.12□□□□□ -0.31
MUC4Q99102 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.12□□□□□ -0.31
MUC4Q99102 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.12□□□□□ -0.31
MUC4Q99102 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 PRORSD1P-202ENST00000563365 2154 ntBASIC13.12□□□□□ -0.31
MUC4Q99102 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MUC4Q99102 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
MUC4Q99102 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MUC4Q99102 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MUC4Q99102 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
MUC4Q99102 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
MUC4Q99102 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.11□□□□□ -0.31
MUC4Q99102 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
MUC4Q99102 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.11□□□□□ -0.31
MUC4Q99102 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
MUC4Q99102 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
MUC4Q99102 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MUC4Q99102 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MUC4Q99102 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms