Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 AC239809.2-201ENST00000415381 517 ntBASIC14.59□□□□□ -0.07
RAB40CQ96S21 KSR1P1-201ENST00000446298 240 ntBASIC14.59□□□□□ -0.07
RAB40CQ96S21 FAM207BP-201ENST00000447172 505 ntBASIC14.59□□□□□ -0.07
RAB40CQ96S21 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 AC026271.3-201ENST00000571884 352 ntBASIC14.59□□□□□ -0.07
RAB40CQ96S21 AC008622.2-201ENST00000617006 1229 ntBASIC14.59□□□□□ -0.07
RAB40CQ96S21 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.59□□□□□ -0.07
RAB40CQ96S21 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40CQ96S21 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40CQ96S21 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40CQ96S21 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.58□□□□□ -0.07
RAB40CQ96S21 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40CQ96S21 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.58□□□□□ -0.07
RAB40CQ96S21 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40CQ96S21 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 KRASP1-201ENST00000407852 552 ntBASIC14.58□□□□□ -0.08
RAB40CQ96S21 AP002982.1-201ENST00000492365 877 ntBASIC14.58□□□□□ -0.08
RAB40CQ96S21 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 AL353708.3-201ENST00000610272 989 ntBASIC14.58□□□□□ -0.08
RAB40CQ96S21 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB40CQ96S21 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40CQ96S21 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.57□□□□□ -0.08
RAB40CQ96S21 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 DUTP2-201ENST00000519164 463 ntBASIC14.57□□□□□ -0.08
RAB40CQ96S21 AC069544.1-201ENST00000609399 999 ntBASIC14.57□□□□□ -0.08
RAB40CQ96S21 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40CQ96S21 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40CQ96S21 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms