Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 AP001059.3-201ENST00000619053 235 ntBASIC19.43■□□□□ 0.7
ALPK3Q96L96 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.43■□□□□ 0.7
ALPK3Q96L96 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 AC023141.13-201ENST00000604991 943 ntBASIC19.43■□□□□ 0.7
ALPK3Q96L96 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
ALPK3Q96L96 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.42■□□□□ 0.7
ALPK3Q96L96 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.42■□□□□ 0.7
ALPK3Q96L96 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.42■□□□□ 0.7
ALPK3Q96L96 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ALPK3Q96L96 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.42■□□□□ 0.7
ALPK3Q96L96 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ALPK3Q96L96 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ALPK3Q96L96 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ALPK3Q96L96 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALPK3Q96L96 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 SIRPAP1-201ENST00000448467 1770 ntBASIC19.41■□□□□ 0.7
ALPK3Q96L96 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 AC132938.5-201ENST00000624980 1813 ntBASIC19.41■□□□□ 0.7
ALPK3Q96L96 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 AC055876.3-201ENST00000431496 288 ntBASIC19.41■□□□□ 0.7
ALPK3Q96L96 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 AC074386.1-202ENST00000463561 864 ntBASIC19.41■□□□□ 0.7
ALPK3Q96L96 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 LINC02560-201ENST00000596379 459 ntBASIC19.41■□□□□ 0.7
ALPK3Q96L96 AC138649.4-201ENST00000612222 287 ntBASIC19.41■□□□□ 0.7
ALPK3Q96L96 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.41■□□□□ 0.7
ALPK3Q96L96 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 AL499627.1-201ENST00000569373 2188 ntBASIC19.41■□□□□ 0.7
ALPK3Q96L96 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALPK3Q96L96 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALPK3Q96L96 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ALPK3Q96L96 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ALPK3Q96L96 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.4■□□□□ 0.7
ALPK3Q96L96 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALPK3Q96L96 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.4■□□□□ 0.7
ALPK3Q96L96 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.4■□□□□ 0.7
ALPK3Q96L96 AL008721.1-201ENST00000609964 604 ntBASIC19.4■□□□□ 0.7
ALPK3Q96L96 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALPK3Q96L96 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALPK3Q96L96 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
ALPK3Q96L96 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms