Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 AL096865.1-201ENST00000606796 927 ntBASIC12□□□□□ -0.49
VPS13DQ5THJ4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12□□□□□ -0.49
VPS13DQ5THJ4 AC012645.4-201ENST00000610691 1061 ntBASIC12□□□□□ -0.49
VPS13DQ5THJ4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13DQ5THJ4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 AL513210.1-201ENST00000629608 234 ntBASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 AC254562.1-201ENST00000417586 456 ntBASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 AL096828.2-201ENST00000567259 1965 ntBASIC11.99□□□□□ -0.49
VPS13DQ5THJ4 CROCCP3-202ENST00000420820 1947 ntBASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 AC091812.2-201ENST00000619081 385 ntBASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 BCAR1-209ENST00000546196 1340 ntBASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 KLF4P1-201ENST00000412782 1185 ntBASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13DQ5THJ4 MIR770-201ENST00000390219 98 ntBASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 AC105339.1-204ENST00000636249 355 ntBASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VPS13DQ5THJ4 AC005829.1-201ENST00000570002 483 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms