Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
SNAPC4Q5SXM2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 SIRPAP1-201ENST00000448467 1770 ntBASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC29.14■■■□□ 2.26
SNAPC4Q5SXM2 AC092919.2-201ENST00000623631 1645 ntBASIC29.14■■■□□ 2.25
SNAPC4Q5SXM2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC29.14■■■□□ 2.25
SNAPC4Q5SXM2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 AL627223.1-201ENST00000416693 442 ntBASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 AC002472.2-201ENST00000442739 958 ntBASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 MEIS3P1-201ENST00000495167 958 ntBASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 DUX4L27-201ENST00000554796 1261 ntBASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 REXO1L3P-201ENST00000622202 1288 ntBASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 AL121761.2-201ENST00000598007 1648 ntBASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
SNAPC4Q5SXM2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 SIGLEC30P-201ENST00000455569 941 ntBASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 AC023141.13-201ENST00000604991 943 ntBASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 AC063926.2-201ENST00000623766 1308 ntBASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 AL161938.1-201ENST00000569833 2180 ntBASIC29.12■■■□□ 2.25
SNAPC4Q5SXM2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 AP002414.1-201ENST00000391405 1147 ntBASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 DDT-204ENST00000404092 805 ntTSL 3 BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC29.11■■■□□ 2.25
SNAPC4Q5SXM2 GK-202ENST00000378941 458 ntTSL 3 BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 AC006116.8-202ENST00000587620 1550 ntBASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 AL049757.1-201ENST00000616842 1596 ntBASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 AL032819.2-201ENST00000624543 2162 ntBASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 FUT8-AS1-201ENST00000621019 1521 ntBASIC29.1■■■□□ 2.25
SNAPC4Q5SXM2 AL049812.1-201ENST00000432563 2267 ntBASIC29.09■■■□□ 2.25
SNAPC4Q5SXM2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SNAPC4Q5SXM2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SNAPC4Q5SXM2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC29.09■■■□□ 2.25
SNAPC4Q5SXM2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC29.09■■■□□ 2.25
SNAPC4Q5SXM2 GAPDHP21-201ENST00000450301 1010 ntBASIC29.09■■■□□ 2.25
SNAPC4Q5SXM2 AC067863.1-201ENST00000494933 530 ntBASIC29.09■■■□□ 2.25
SNAPC4Q5SXM2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC29.09■■■□□ 2.25
SNAPC4Q5SXM2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms