Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX4Q33E94 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFX4Q33E94 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.74■□□□□ 0.27
RFX4Q33E94 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
RFX4Q33E94 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RFX4Q33E94 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RFX4Q33E94 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX4Q33E94 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RFX4Q33E94 MESTP1-201ENST00000404287 994 ntBASIC16.73■□□□□ 0.27
RFX4Q33E94 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.73■□□□□ 0.27
RFX4Q33E94 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.73■□□□□ 0.27
RFX4Q33E94 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
RFX4Q33E94 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RFX4Q33E94 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.73■□□□□ 0.27
RFX4Q33E94 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFX4Q33E94 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RFX4Q33E94 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX4Q33E94 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX4Q33E94 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.72■□□□□ 0.27
RFX4Q33E94 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RFX4Q33E94 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.72■□□□□ 0.27
RFX4Q33E94 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX4Q33E94 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RFX4Q33E94 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX4Q33E94 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RFX4Q33E94 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX4Q33E94 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.72■□□□□ 0.27
RFX4Q33E94 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RFX4Q33E94 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX4Q33E94 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.72■□□□□ 0.27
RFX4Q33E94 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFX4Q33E94 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX4Q33E94 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.71■□□□□ 0.27
RFX4Q33E94 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.71■□□□□ 0.27
RFX4Q33E94 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX4Q33E94 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
RFX4Q33E94 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.71■□□□□ 0.27
RFX4Q33E94 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.71■□□□□ 0.27
RFX4Q33E94 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX4Q33E94 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.71■□□□□ 0.27
RFX4Q33E94 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 MIR4651-201ENST00000582622 73 ntBASIC16.71■□□□□ 0.27
RFX4Q33E94 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFX4Q33E94 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX4Q33E94 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.71■□□□□ 0.27
RFX4Q33E94 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms