Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 Z73361.1-201ENST00000423690 612 ntBASIC19.25■□□□□ 0.67
HOXD11P31277 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD11P31277 MTND1P33-201ENST00000446251 917 ntBASIC19.25■□□□□ 0.67
HOXD11P31277 OR6C72P-201ENST00000451403 892 ntBASIC19.25■□□□□ 0.67
HOXD11P31277 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD11P31277 NDUFA5P5-201ENST00000468361 342 ntBASIC19.25■□□□□ 0.67
HOXD11P31277 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXD11P31277 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD11P31277 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD11P31277 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HOXD11P31277 NEK4P2-201ENST00000580004 1012 ntBASIC19.25■□□□□ 0.67
HOXD11P31277 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD11P31277 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD11P31277 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXD11P31277 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD11P31277 LINC00969-278ENST00000626870 851 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD11P31277 AL078582.1-201ENST00000641922 511 ntBASIC19.25■□□□□ 0.67
HOXD11P31277 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD11P31277 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD11P31277 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD11P31277 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD11P31277 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD11P31277 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXD11P31277 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXD11P31277 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD11P31277 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXD11P31277 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXD11P31277 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD11P31277 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD11P31277 RPL31-204ENST00000409038 817 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD11P31277 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD11P31277 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HOXD11P31277 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD11P31277 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HOXD11P31277 AC093909.1-201ENST00000504731 1122 ntBASIC19.24■□□□□ 0.67
HOXD11P31277 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD11P31277 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD11P31277 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.24■□□□□ 0.67
HOXD11P31277 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.24■□□□□ 0.67
HOXD11P31277 AC139795.3-201ENST00000606358 541 ntBASIC19.24■□□□□ 0.67
HOXD11P31277 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXD11P31277 AL118558.3-201ENST00000607414 1079 ntBASIC19.24■□□□□ 0.67
HOXD11P31277 AC131235.4-201ENST00000609288 620 ntBASIC19.24■□□□□ 0.67
HOXD11P31277 AL162233.1-201ENST00000620014 944 ntBASIC19.24■□□□□ 0.67
HOXD11P31277 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HOXD11P31277 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
HOXD11P31277 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXD11P31277 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXD11P31277 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXD11P31277 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
HOXD11P31277 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HOXD11P31277 GUSBP5-202ENST00000510805 1989 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXD11P31277 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
HOXD11P31277 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 HNRNPA1P22-201ENST00000437295 946 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 SETD6P1-201ENST00000444575 317 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 LINC00265-3P-201ENST00000447588 903 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 SAPCD2P3-201ENST00000455031 850 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXD11P31277 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXD11P31277 AC117525.1-201ENST00000515228 503 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 TRIQK-220ENST00000524037 865 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXD11P31277 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXD11P31277 MIR3687-2-201ENST00000577708 61 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXD11P31277 AC011467.4-201ENST00000594891 528 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXD11P31277 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXD11P31277 AP000553.2-201ENST00000609038 441 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 MIR3687-1-201ENST00000614492 61 ntBASIC19.23■□□□□ 0.67
HOXD11P31277 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXD11P31277 OR4K14-202ENST00000641793 1245 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HOXD11P31277 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXD11P31277 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXD11P31277 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HOXD11P31277 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms