Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC124016.1-201ENST00000609552 612 ntBASIC20.19■□□□□ 0.82
TPM3P06753 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TPM3P06753 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.19■□□□□ 0.82
TPM3P06753 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TPM3P06753 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TPM3P06753 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.18■□□□□ 0.82
TPM3P06753 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.18■□□□□ 0.82
TPM3P06753 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
TPM3P06753 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 MCCD1P1-208ENST00000445732 328 ntBASIC20.18■□□□□ 0.82
TPM3P06753 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.18■□□□□ 0.82
TPM3P06753 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.18■□□□□ 0.82
TPM3P06753 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.18■□□□□ 0.82
TPM3P06753 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.18■□□□□ 0.82
TPM3P06753 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TPM3P06753 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.18■□□□□ 0.82
TPM3P06753 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.18■□□□□ 0.82
TPM3P06753 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.18■□□□□ 0.82
TPM3P06753 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.18■□□□□ 0.82
TPM3P06753 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPM3P06753 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
TPM3P06753 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 RPS2P4-201ENST00000476944 856 ntBASIC20.17■□□□□ 0.82
TPM3P06753 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.17■□□□□ 0.82
TPM3P06753 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TPM3P06753 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.17■□□□□ 0.82
TPM3P06753 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TPM3P06753 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TPM3P06753 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TPM3P06753 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.17■□□□□ 0.82
TPM3P06753 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.17■□□□□ 0.82
TPM3P06753 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.17■□□□□ 0.82
TPM3P06753 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPM3P06753 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TPM3P06753 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TPM3P06753 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TPM3P06753 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TPM3P06753 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 RNA5SP413-201ENST00000516373 109 ntBASIC20.16■□□□□ 0.82
TPM3P06753 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TPM3P06753 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.16■□□□□ 0.82
TPM3P06753 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 KRT8P50-201ENST00000562022 1438 ntBASIC20.16■□□□□ 0.82
TPM3P06753 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.16■□□□□ 0.82
TPM3P06753 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.16■□□□□ 0.82
TPM3P06753 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPM3P06753 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.16■□□□□ 0.82
TPM3P06753 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPM3P06753 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms