Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 AP000525.1-201ENST00000608286 694 ntBASIC16.2■□□□□ 0.18
HLA-DPB1P04440 DGCR10-201ENST00000609839 495 ntBASIC16.2■□□□□ 0.18
HLA-DPB1P04440 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 AP001094.4-201ENST00000579008 2176 ntBASIC16.19■□□□□ 0.18
HLA-DPB1P04440 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 AL390955.1-201ENST00000428694 934 ntBASIC16.19■□□□□ 0.18
HLA-DPB1P04440 MFAP1P1-201ENST00000442257 1255 ntBASIC16.19■□□□□ 0.18
HLA-DPB1P04440 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 KRT18P55-202ENST00000578578 1546 ntBASIC16.19■□□□□ 0.18
HLA-DPB1P04440 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DPB1P04440 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 NKILA-202ENST00000614771 2598 ntBASIC16.18■□□□□ 0.18
HLA-DPB1P04440 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.18■□□□□ 0.18
HLA-DPB1P04440 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPB1P04440 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 AC022211.2-201ENST00000585075 2527 ntBASIC16.17■□□□□ 0.18
HLA-DPB1P04440 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DPB1P04440 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms