Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.96■□□□□ 0.47
PDGFBP01127 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.96■□□□□ 0.47
PDGFBP01127 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 RHOQP3-201ENST00000437982 621 ntBASIC17.96■□□□□ 0.47
PDGFBP01127 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.96■□□□□ 0.47
PDGFBP01127 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 INGX-202ENST00000489074 768 ntBASIC17.96■□□□□ 0.47
PDGFBP01127 DUX4L17-201ENST00000557360 1267 ntBASIC17.96■□□□□ 0.47
PDGFBP01127 AC087641.1-201ENST00000557561 1021 ntBASIC17.96■□□□□ 0.47
PDGFBP01127 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.96■□□□□ 0.47
PDGFBP01127 OR7E47P-204ENST00000575924 449 ntBASIC17.96■□□□□ 0.47
PDGFBP01127 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.96■□□□□ 0.47
PDGFBP01127 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFBP01127 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDGFBP01127 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.95■□□□□ 0.46
PDGFBP01127 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDGFBP01127 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDGFBP01127 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PDGFBP01127 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFBP01127 AC002472.2-201ENST00000442739 958 ntBASIC17.95■□□□□ 0.46
PDGFBP01127 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFBP01127 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.95■□□□□ 0.46
PDGFBP01127 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.95■□□□□ 0.46
PDGFBP01127 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.95■□□□□ 0.46
PDGFBP01127 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFBP01127 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
PDGFBP01127 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDGFBP01127 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 NCF1C-201ENST00000438382 1427 ntBASIC17.95■□□□□ 0.46
PDGFBP01127 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFBP01127 AIRN-201ENST00000601203 4374 ntBASIC17.95■□□□□ 0.46
PDGFBP01127 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDGFBP01127 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDGFBP01127 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.95■□□□□ 0.46
PDGFBP01127 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFBP01127 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFBP01127 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFBP01127 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFBP01127 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.94■□□□□ 0.46
PDGFBP01127 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDGFBP01127 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.94■□□□□ 0.46
PDGFBP01127 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.94■□□□□ 0.46
PDGFBP01127 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PDGFBP01127 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDGFBP01127 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
PDGFBP01127 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.94■□□□□ 0.46
PDGFBP01127 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 RN7SL204P-201ENST00000582831 262 ntBASIC17.94■□□□□ 0.46
PDGFBP01127 AL008721.1-201ENST00000609964 604 ntBASIC17.94■□□□□ 0.46
PDGFBP01127 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.94■□□□□ 0.46
PDGFBP01127 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PDGFBP01127 AL499627.1-201ENST00000569373 2188 ntBASIC17.94■□□□□ 0.46
PDGFBP01127 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDGFBP01127 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.94■□□□□ 0.46
PDGFBP01127 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PDGFBP01127 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFBP01127 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFBP01127 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFBP01127 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFBP01127 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDGFBP01127 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFBP01127 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.93■□□□□ 0.46
PDGFBP01127 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFBP01127 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFBP01127 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.93■□□□□ 0.46
PDGFBP01127 MEIS3P1-201ENST00000495167 958 ntBASIC17.93■□□□□ 0.46
PDGFBP01127 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.93■□□□□ 0.46
PDGFBP01127 TERF1P3-201ENST00000505638 1227 ntBASIC17.93■□□□□ 0.46
PDGFBP01127 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms