Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.34■□□□□ 0.21
SMAD9O15198 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.34■□□□□ 0.21
SMAD9O15198 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.34■□□□□ 0.21
SMAD9O15198 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.34■□□□□ 0.21
SMAD9O15198 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SMAD9O15198 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.34■□□□□ 0.21
SMAD9O15198 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
SMAD9O15198 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.34■□□□□ 0.21
SMAD9O15198 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SMAD9O15198 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SMAD9O15198 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.34■□□□□ 0.21
SMAD9O15198 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.34■□□□□ 0.21
SMAD9O15198 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.34■□□□□ 0.21
SMAD9O15198 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 GMCL1P1-201ENST00000463439 1581 ntBASIC16.34■□□□□ 0.21
SMAD9O15198 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMAD9O15198 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMAD9O15198 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SMAD9O15198 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMAD9O15198 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMAD9O15198 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SMAD9O15198 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.33■□□□□ 0.2
SMAD9O15198 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SMAD9O15198 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMAD9O15198 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD9O15198 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.33■□□□□ 0.2
SMAD9O15198 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.33■□□□□ 0.2
SMAD9O15198 AL136038.3-201ENST00000561909 1096 ntBASIC16.33■□□□□ 0.2
SMAD9O15198 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD9O15198 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.33■□□□□ 0.2
SMAD9O15198 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.33■□□□□ 0.2
SMAD9O15198 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD9O15198 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.33■□□□□ 0.2
SMAD9O15198 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 LINC01126-201ENST00000623515 1646 ntBASIC16.33■□□□□ 0.2
SMAD9O15198 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD9O15198 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD9O15198 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD9O15198 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.33■□□□□ 0.2
SMAD9O15198 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SMAD9O15198 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 ESPNP-201ENST00000270691 2015 ntBASIC16.32■□□□□ 0.2
SMAD9O15198 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD9O15198 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 MIR662-201ENST00000384847 95 ntBASIC16.32■□□□□ 0.2
SMAD9O15198 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SMAD9O15198 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.32■□□□□ 0.2
SMAD9O15198 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD9O15198 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.32■□□□□ 0.2
SMAD9O15198 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD9O15198 FAM86EP-206ENST00000510506 987 ntBASIC16.32■□□□□ 0.2
SMAD9O15198 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SMAD9O15198 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD9O15198 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD9O15198 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.32■□□□□ 0.2
SMAD9O15198 AC024563.2-201ENST00000603282 481 ntBASIC16.32■□□□□ 0.2
SMAD9O15198 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.32■□□□□ 0.2
SMAD9O15198 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SMAD9O15198 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SMAD9O15198 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD9O15198 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD9O15198 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms