Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SDHDO14521 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SDHDO14521 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SDHDO14521 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.37■□□□□ 0.37
SDHDO14521 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SDHDO14521 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SDHDO14521 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.36■□□□□ 0.37
SDHDO14521 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SDHDO14521 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.36■□□□□ 0.37
SDHDO14521 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.36■□□□□ 0.37
SDHDO14521 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.36■□□□□ 0.37
SDHDO14521 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.36■□□□□ 0.37
SDHDO14521 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SDHDO14521 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SDHDO14521 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SDHDO14521 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.36■□□□□ 0.37
SDHDO14521 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SDHDO14521 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.35■□□□□ 0.37
SDHDO14521 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.35■□□□□ 0.37
SDHDO14521 REXO1L11P-201ENST00000620964 1927 ntBASIC17.35■□□□□ 0.37
SDHDO14521 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.35■□□□□ 0.37
SDHDO14521 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SDHDO14521 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SDHDO14521 PRORSD1P-201ENST00000295112 541 ntBASIC17.35■□□□□ 0.37
SDHDO14521 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.35■□□□□ 0.37
SDHDO14521 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 SEC1P-202ENST00000473944 940 ntBASIC17.35■□□□□ 0.37
SDHDO14521 BX088651.1-201ENST00000540551 451 ntBASIC17.35■□□□□ 0.37
SDHDO14521 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.35■□□□□ 0.37
SDHDO14521 AP001412.1-201ENST00000608405 714 ntBASIC17.35■□□□□ 0.37
SDHDO14521 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.35■□□□□ 0.37
SDHDO14521 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.35■□□□□ 0.37
SDHDO14521 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SDHDO14521 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SDHDO14521 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SDHDO14521 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.35■□□□□ 0.37
SDHDO14521 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.35■□□□□ 0.37
SDHDO14521 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDHDO14521 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDHDO14521 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDHDO14521 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDHDO14521 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SDHDO14521 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms