Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AL353593.2-201ENST00000602529 1483 ntBASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 KRT8P44-201ENST00000441609 1350 ntBASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 AC092580.3-201ENST00000430932 139 ntBASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 AC009102.3-201ENST00000623118 1491 ntBASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC85CA6NKD9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 SPTLC1P1-201ENST00000447199 261 ntBASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CCDC85CA6NKD9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 AL513480.1-201ENST00000451731 511 ntBASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 AC132938.2-201ENST00000579188 680 ntBASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 AL591163.1-201ENST00000641757 987 ntBASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 AC129492.6-201ENST00000611383 1305 ntBASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CCDC85CA6NKD9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85CA6NKD9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms