Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 AC008764.6-201ENST00000595909 2069 ntBASIC20.18■□□□□ 0.82
PUF60Q9UHX1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.18■□□□□ 0.82
PUF60Q9UHX1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 AL023284.2-201ENST00000405850 579 ntBASIC20.17■□□□□ 0.82
PUF60Q9UHX1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
PUF60Q9UHX1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 MCCD1P1-208ENST00000445732 328 ntBASIC20.16■□□□□ 0.82
PUF60Q9UHX1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 MIR3180-5-201ENST00000583743 153 ntBASIC20.16■□□□□ 0.82
PUF60Q9UHX1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
PUF60Q9UHX1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 AC036111.1-201ENST00000533973 1582 ntBASIC20.15■□□□□ 0.82
PUF60Q9UHX1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PUF60Q9UHX1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
PUF60Q9UHX1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
PUF60Q9UHX1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PUF60Q9UHX1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PUF60Q9UHX1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PUF60Q9UHX1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
PUF60Q9UHX1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.14■□□□□ 0.82
PUF60Q9UHX1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.14■□□□□ 0.82
PUF60Q9UHX1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.14■□□□□ 0.81
PUF60Q9UHX1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PUF60Q9UHX1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PUF60Q9UHX1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PUF60Q9UHX1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.14■□□□□ 0.81
PUF60Q9UHX1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PUF60Q9UHX1 AC016734.2-201ENST00000624325 1377 ntBASIC20.14■□□□□ 0.81
PUF60Q9UHX1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms