Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSMD1Q96PZ7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 PMPCAP1-201ENST00000508114 1576 ntBASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 MIR6799-201ENST00000620297 69 ntBASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSMD1Q96PZ7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 HCG4B-203ENST00000450128 991 ntBASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 AC068472.1-201ENST00000474589 881 ntBASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 AC051619.7-201ENST00000568314 623 ntBASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 AC005593.1-201ENST00000624894 515 ntBASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 AC136632.2-201ENST00000512891 861 ntBASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.23■□□□□ 0.03
CSMD1Q96PZ7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 AC108073.2-201ENST00000464002 357 ntBASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 AC105339.1-204ENST00000636249 355 ntBASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 LINC01126-201ENST00000623515 1646 ntBASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 ARSEP1-201ENST00000420443 635 ntBASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 VN2R19P-201ENST00000442399 1052 ntBASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 AL132655.2-201ENST00000596276 594 ntBASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CSMD1Q96PZ7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 AP002414.1-201ENST00000391405 1147 ntBASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 IGLL3P-201ENST00000412472 434 ntBASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.21■□□□□ 0.03
CSMD1Q96PZ7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms