Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM11Q96F44 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 LINC00602-201ENST00000629776 2065 ntBASIC19.05■□□□□ 0.64
TRIM11Q96F44 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM11Q96F44 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TRIM11Q96F44 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRIM11Q96F44 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM11Q96F44 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 AC010203.1-204ENST00000548782 407 ntBASIC19.05■□□□□ 0.64
TRIM11Q96F44 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM11Q96F44 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRIM11Q96F44 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
TRIM11Q96F44 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM11Q96F44 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM11Q96F44 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 AC113347.1-201ENST00000413321 391 ntBASIC19.04■□□□□ 0.64
TRIM11Q96F44 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 KRT18P65-201ENST00000439811 1286 ntBASIC19.04■□□□□ 0.64
TRIM11Q96F44 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 AL136038.4-201ENST00000603606 1261 ntBASIC19.04■□□□□ 0.64
TRIM11Q96F44 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 AC005363.2-201ENST00000618631 242 ntBASIC19.04■□□□□ 0.64
TRIM11Q96F44 AC073912.3-201ENST00000624414 853 ntBASIC19.04■□□□□ 0.64
TRIM11Q96F44 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM11Q96F44 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TRIM11Q96F44 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 AC133561.5-201ENST00000635547 218 ntBASIC19.03■□□□□ 0.64
TRIM11Q96F44 AC097493.4-201ENST00000641197 219 ntBASIC19.03■□□□□ 0.64
TRIM11Q96F44 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM11Q96F44 AL391807.1-203ENST00000604392 2365 ntBASIC19.03■□□□□ 0.64
TRIM11Q96F44 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM11Q96F44 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
TRIM11Q96F44 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM11Q96F44 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM11Q96F44 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM11Q96F44 AL137013.1-201ENST00000432946 1228 ntBASIC19.02■□□□□ 0.64
TRIM11Q96F44 BX664615.1-201ENST00000443558 458 ntBASIC19.02■□□□□ 0.64
TRIM11Q96F44 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM11Q96F44 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRIM11Q96F44 AL441883.1-201ENST00000566170 1045 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms