Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ALMS1Q8TCU4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ALMS1Q8TCU4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 AC067863.1-201ENST00000494933 530 ntBASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 AC025580.3-201ENST00000617932 1424 ntBASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 AL049757.1-201ENST00000616842 1596 ntBASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 AL008721.1-201ENST00000609964 604 ntBASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ALMS1Q8TCU4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 AL158211.5-201ENST00000623583 2518 ntBASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 AP002414.1-201ENST00000391405 1147 ntBASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 INGX-202ENST00000489074 768 ntBASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 MIR943-201ENST00000401286 94 ntBASIC12.01□□□□□ -0.49
ALMS1Q8TCU4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms