Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 PKD1P5-201ENST00000532415 10291 ntBASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 BX088651.1-201ENST00000540551 451 ntBASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 SLC25A1P4-201ENST00000567977 778 ntBASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 FSCN1P1-201ENST00000568912 1481 ntBASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PPP4R4Q6NUP7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 AC004951.3-201ENST00000418645 1148 ntBASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 AL390955.1-201ENST00000428694 934 ntBASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 RBM17P1-201ENST00000453646 1190 ntBASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 AC026271.3-201ENST00000571884 352 ntBASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 AC073912.3-201ENST00000624414 853 ntBASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 AC011676.5-201ENST00000624864 2660 ntBASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 AL139384.1-201ENST00000612143 3047 ntBASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
PPP4R4Q6NUP7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 CRYGFP-201ENST00000418459 633 ntBASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 B3GAT3P1-201ENST00000471720 806 ntBASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PPP4R4Q6NUP7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.27■□□□□ 0.35
PPP4R4Q6NUP7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PPP4R4Q6NUP7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PPP4R4Q6NUP7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PPP4R4Q6NUP7 AC006116.8-202ENST00000587620 1550 ntBASIC17.27■□□□□ 0.35
PPP4R4Q6NUP7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms