Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 DUTP2-201ENST00000519164 463 ntBASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 KRT8P7-201ENST00000533003 1432 ntBASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LINC00242Q5T6M2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 CA15P1-201ENST00000481698 905 ntBASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 AC092666.2-201ENST00000613287 246 ntBASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00242Q5T6M2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 KRT18P23-201ENST00000435622 1283 ntBASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 MFAP1P1-201ENST00000442257 1255 ntBASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00242Q5T6M2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms