Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 Z83851.2-201ENST00000609564 659 ntBASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 AC083906.6-201ENST00000641366 219 ntBASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 AC068587.9-201ENST00000641814 219 ntBASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 AC079781.4-201ENST00000641908 219 ntBASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 KRT8P50-201ENST00000562022 1438 ntBASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 AP005117.1-201ENST00000584346 1413 ntBASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 HLA-J-201ENST00000462773 1622 ntBASIC19.22■□□□□ 0.67
CTC1Q2NKJ3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 AC018470.1-201ENST00000624790 3129 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 RPS2P1-201ENST00000434010 821 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 DNAJB3-201ENST00000446806 729 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 AC004967.1-201ENST00000453589 447 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 AC009533.2-201ENST00000543664 586 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 SART3-203ENST00000546611 1184 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 AC012640.2-201ENST00000561606 901 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 AC040169.1-201ENST00000565382 521 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 AL161938.1-201ENST00000569833 2180 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 MIR3687-2-201ENST00000577708 61 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 MIR3687-1-201ENST00000614492 61 ntBASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTC1Q2NKJ3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 RPS8P6-201ENST00000426177 609 ntBASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 RNA5SP415-201ENST00000517246 115 ntBASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.2■□□□□ 0.66
CTC1Q2NKJ3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 AC068472.1-201ENST00000474589 881 ntBASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 AC092910.1-201ENST00000482027 1129 ntBASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 AC134684.3-201ENST00000641758 218 ntBASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTC1Q2NKJ3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms