Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 HNRNPA1P28-201ENST00000424481 961 ntBASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SPHKAPQ2M3C7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 AC003669.1-201ENST00000334569 611 ntBASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 AL020989.1-201ENST00000422979 469 ntBASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 AL589182.2-201ENST00000619332 1049 ntBASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 AL805961.1-202ENST00000641562 540 ntBASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 AL049757.1-201ENST00000616842 1596 ntBASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPHKAPQ2M3C7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 WIZP1-201ENST00000531444 2299 ntBASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 DNAJB3-201ENST00000446806 729 ntBASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 AL691403.2-201ENST00000618460 490 ntBASIC25.66■■□□□ 1.7
SPHKAPQ2M3C7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 BX276092.7-203ENST00000637198 1536 ntBASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 AC009949.1-201ENST00000623048 1830 ntBASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 AC004706.3-202ENST00000621574 984 ntBASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPHKAPQ2M3C7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC25.64■■□□□ 1.7
SPHKAPQ2M3C7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SPHKAPQ2M3C7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SPHKAPQ2M3C7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC25.64■■□□□ 1.7
SPHKAPQ2M3C7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC25.64■■□□□ 1.7
SPHKAPQ2M3C7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
SPHKAPQ2M3C7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC25.64■■□□□ 1.69
SPHKAPQ2M3C7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SPHKAPQ2M3C7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SPHKAPQ2M3C7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.69
SPHKAPQ2M3C7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC25.64■■□□□ 1.69
SPHKAPQ2M3C7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SPHKAPQ2M3C7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SPHKAPQ2M3C7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SPHKAPQ2M3C7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 PC-208ENST00000529047 1607 ntTSL 3 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC25.63■■□□□ 1.69
SPHKAPQ2M3C7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms