Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC067863.1-201ENST00000494933 530 ntBASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 AC004790.2-201ENST00000623588 572 ntBASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 AL158211.5-201ENST00000623583 2518 ntBASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 BASP1P1-201ENST00000430708 665 ntBASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 PRYP5-201ENST00000451909 266 ntBASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO4Q2I0M5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 KRT19P2-202ENST00000557173 1012 ntBASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 AC091812.2-201ENST00000619081 385 ntBASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO4Q2I0M5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 ELK2BP-201ENST00000415014 1224 ntBASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO4Q2I0M5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms