Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL024508.2-201ENST00000607749 1894 ntBASIC18.17■□□□□ 0.5
LIMK2P53671 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.17■□□□□ 0.5
LIMK2P53671 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.17■□□□□ 0.5
LIMK2P53671 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.17■□□□□ 0.5
LIMK2P53671 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.17■□□□□ 0.5
LIMK2P53671 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.17■□□□□ 0.5
LIMK2P53671 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 BCL2-203ENST00000589955 5011 ntBASIC18.16■□□□□ 0.5
LIMK2P53671 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.16■□□□□ 0.5
LIMK2P53671 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.16■□□□□ 0.5
LIMK2P53671 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.16■□□□□ 0.5
LIMK2P53671 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
LIMK2P53671 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.16■□□□□ 0.5
LIMK2P53671 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.16■□□□□ 0.5
LIMK2P53671 VENTXP5-201ENST00000523979 775 ntBASIC18.16■□□□□ 0.5
LIMK2P53671 ZNF444P1-201ENST00000559497 298 ntBASIC18.16■□□□□ 0.5
LIMK2P53671 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
LIMK2P53671 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.16■□□□□ 0.5
LIMK2P53671 AC083849.1-201ENST00000615227 514 ntBASIC18.16■□□□□ 0.5
LIMK2P53671 HYMAI.1-201ENST00000620949 238 ntBASIC18.16■□□□□ 0.5
LIMK2P53671 AC112497.1-201ENST00000624824 639 ntBASIC18.16■□□□□ 0.5
LIMK2P53671 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
LIMK2P53671 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LIMK2P53671 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIMK2P53671 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LIMK2P53671 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.15■□□□□ 0.5
LIMK2P53671 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.15■□□□□ 0.5
LIMK2P53671 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LIMK2P53671 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LIMK2P53671 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.15■□□□□ 0.5
LIMK2P53671 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.15■□□□□ 0.5
LIMK2P53671 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.15■□□□□ 0.5
LIMK2P53671 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.15■□□□□ 0.5
LIMK2P53671 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
LIMK2P53671 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LIMK2P53671 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LIMK2P53671 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK2P53671 LINC01311-201ENST00000565162 1445 ntBASIC18.15■□□□□ 0.5
LIMK2P53671 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LIMK2P53671 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LIMK2P53671 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK2P53671 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK2P53671 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK2P53671 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LIMK2P53671 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LIMK2P53671 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
LIMK2P53671 KRT18P56-201ENST00000507275 550 ntBASIC18.14■□□□□ 0.49
LIMK2P53671 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.14■□□□□ 0.49
LIMK2P53671 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK2P53671 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK2P53671 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK2P53671 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms