Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC073592.5-201ENST00000624854 528 ntBASIC19.76■□□□□ 0.75
ACLYP53396 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.76■□□□□ 0.75
ACLYP53396 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.76■□□□□ 0.75
ACLYP53396 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.76■□□□□ 0.75
ACLYP53396 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.76■□□□□ 0.75
ACLYP53396 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.76■□□□□ 0.75
ACLYP53396 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACLYP53396 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
ACLYP53396 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 AC254562.1-201ENST00000417586 456 ntBASIC19.75■□□□□ 0.75
ACLYP53396 CYMP-203ENST00000474680 1263 ntBASIC19.75■□□□□ 0.75
ACLYP53396 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.75■□□□□ 0.75
ACLYP53396 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 RFPL4AP1-201ENST00000530883 850 ntBASIC19.75■□□□□ 0.75
ACLYP53396 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ACLYP53396 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.75■□□□□ 0.75
ACLYP53396 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 C20orf181-201ENST00000623918 480 ntBASIC19.75■□□□□ 0.75
ACLYP53396 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ACLYP53396 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACLYP53396 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.75■□□□□ 0.75
ACLYP53396 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.74■□□□□ 0.75
ACLYP53396 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.74■□□□□ 0.75
ACLYP53396 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.74■□□□□ 0.75
ACLYP53396 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 ELK2BP-201ENST00000415014 1224 ntBASIC19.74■□□□□ 0.75
ACLYP53396 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
ACLYP53396 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.74■□□□□ 0.75
ACLYP53396 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.74■□□□□ 0.75
ACLYP53396 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.74■□□□□ 0.75
ACLYP53396 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.74■□□□□ 0.75
ACLYP53396 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.74■□□□□ 0.75
ACLYP53396 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACLYP53396 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.74■□□□□ 0.75
ACLYP53396 AC006504.4-201ENST00000592118 1568 ntBASIC19.74■□□□□ 0.75
ACLYP53396 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
ACLYP53396 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACLYP53396 KRT8P47-201ENST00000604727 1398 ntBASIC19.73■□□□□ 0.75
ACLYP53396 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.73■□□□□ 0.75
ACLYP53396 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACLYP53396 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.73■□□□□ 0.75
ACLYP53396 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACLYP53396 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ACLYP53396 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ACLYP53396 AL020989.1-201ENST00000422979 469 ntBASIC19.73■□□□□ 0.75
ACLYP53396 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.73■□□□□ 0.75
ACLYP53396 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.73■□□□□ 0.75
ACLYP53396 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.73■□□□□ 0.75
ACLYP53396 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACLYP53396 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.73■□□□□ 0.75
ACLYP53396 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.73■□□□□ 0.75
ACLYP53396 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.73■□□□□ 0.75
ACLYP53396 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
ACLYP53396 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACLYP53396 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.73■□□□□ 0.75
ACLYP53396 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACLYP53396 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
ACLYP53396 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACLYP53396 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACLYP53396 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.73■□□□□ 0.75
ACLYP53396 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACLYP53396 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACLYP53396 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACLYP53396 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.72■□□□□ 0.75
ACLYP53396 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ACLYP53396 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.72■□□□□ 0.75
ACLYP53396 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.72■□□□□ 0.75
ACLYP53396 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.72■□□□□ 0.75
ACLYP53396 HTR5BP-201ENST00000430851 1154 ntBASIC19.72■□□□□ 0.75
ACLYP53396 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.72■□□□□ 0.75
ACLYP53396 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
ACLYP53396 VN2R19P-201ENST00000442399 1052 ntBASIC19.72■□□□□ 0.75
ACLYP53396 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACLYP53396 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ACLYP53396 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms