Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 NUDT16P1-203ENST00000513809 620 ntBASIC15.29■□□□□ 0.04
HIST1H1DP16402 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.29■□□□□ 0.04
HIST1H1DP16402 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H1DP16402 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H1DP16402 MIR3180-4-201ENST00000582223 153 ntBASIC15.29■□□□□ 0.04
HIST1H1DP16402 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1DP16402 AC124067.4-201ENST00000519691 2379 ntBASIC15.29■□□□□ 0.04
HIST1H1DP16402 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1DP16402 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1DP16402 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H1DP16402 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H1DP16402 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H1DP16402 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1DP16402 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1DP16402 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H1DP16402 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1DP16402 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST1H1DP16402 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1DP16402 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H1DP16402 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST1H1DP16402 AL121761.2-201ENST00000598007 1648 ntBASIC15.28■□□□□ 0.04
HIST1H1DP16402 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 CROCCP2-202ENST00000412962 2773 ntBASIC15.28■□□□□ 0.04
HIST1H1DP16402 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 AC100803.2-201ENST00000562459 1963 ntBASIC15.28■□□□□ 0.04
HIST1H1DP16402 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H1DP16402 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H1DP16402 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H1DP16402 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H1DP16402 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H1DP16402 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H1DP16402 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H1DP16402 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H1DP16402 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H1DP16402 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H1DP16402 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST1H1DP16402 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HIST1H1DP16402 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H1DP16402 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HIST1H1DP16402 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST1H1DP16402 CRYGFP-201ENST00000418459 633 ntBASIC15.27■□□□□ 0.04
HIST1H1DP16402 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.27■□□□□ 0.04
HIST1H1DP16402 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST1H1DP16402 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.27■□□□□ 0.04
HIST1H1DP16402 AC104390.1-201ENST00000555663 520 ntBASIC15.27■□□□□ 0.04
HIST1H1DP16402 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.27■□□□□ 0.04
HIST1H1DP16402 WWOX-216ENST00000569818 525 ntBASIC15.27■□□□□ 0.04
HIST1H1DP16402 FAM197Y4-202ENST00000622692 608 ntBASIC15.27■□□□□ 0.04
HIST1H1DP16402 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H1DP16402 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H1DP16402 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.27■□□□□ 0.03
HIST1H1DP16402 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HIST1H1DP16402 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.27■□□□□ 0.03
HIST1H1DP16402 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.27■□□□□ 0.03
HIST1H1DP16402 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H1DP16402 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H1DP16402 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H1DP16402 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms