Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 AL353807.1-201ENST00000427475 662 ntBASIC20.66■□□□□ 0.9
MBD3O95983 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD3O95983 AC011506.1-201ENST00000474329 610 ntBASIC20.66■□□□□ 0.9
MBD3O95983 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.66■□□□□ 0.9
MBD3O95983 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD3O95983 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MBD3O95983 AL024508.2-201ENST00000607749 1894 ntBASIC20.66■□□□□ 0.9
MBD3O95983 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
MBD3O95983 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MBD3O95983 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.66■□□□□ 0.9
MBD3O95983 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3O95983 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MBD3O95983 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.65■□□□□ 0.9
MBD3O95983 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 B3GAT3P1-201ENST00000471720 806 ntBASIC20.65■□□□□ 0.9
MBD3O95983 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.65■□□□□ 0.9
MBD3O95983 AC142086.2-201ENST00000569753 217 ntBASIC20.65■□□□□ 0.9
MBD3O95983 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
MBD3O95983 MIR6786-201ENST00000616843 113 ntBASIC20.65■□□□□ 0.9
MBD3O95983 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
MBD3O95983 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3O95983 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
MBD3O95983 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.65■□□□□ 0.9
MBD3O95983 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3O95983 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
MBD3O95983 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3O95983 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3O95983 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3O95983 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
MBD3O95983 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.64■□□□□ 0.9
MBD3O95983 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3O95983 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3O95983 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3O95983 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.64■□□□□ 0.9
MBD3O95983 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3O95983 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 KRT8P7-201ENST00000533003 1432 ntBASIC20.64■□□□□ 0.89
MBD3O95983 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MBD3O95983 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.64■□□□□ 0.89
MBD3O95983 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 AC026366.1-201ENST00000488803 879 ntBASIC20.64■□□□□ 0.89
MBD3O95983 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.64■□□□□ 0.89
MBD3O95983 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.64■□□□□ 0.89
MBD3O95983 AC009065.1-201ENST00000564055 1225 ntBASIC20.64■□□□□ 0.89
MBD3O95983 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.64■□□□□ 0.89
MBD3O95983 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 AP000692.2-201ENST00000608391 879 ntBASIC20.64■□□□□ 0.89
MBD3O95983 CR392000.1-201ENST00000624770 1228 ntBASIC20.64■□□□□ 0.89
MBD3O95983 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.64■□□□□ 0.89
MBD3O95983 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.64■□□□□ 0.89
MBD3O95983 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.64■□□□□ 0.89
MBD3O95983 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.64■□□□□ 0.89
MBD3O95983 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.64■□□□□ 0.89
MBD3O95983 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3O95983 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.63■□□□□ 0.89
MBD3O95983 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 AC018695.7-201ENST00000624587 2492 ntBASIC20.63■□□□□ 0.89
MBD3O95983 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
MBD3O95983 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
MBD3O95983 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MBD3O95983 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MBD3O95983 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.63■□□□□ 0.89
MBD3O95983 AL109923.1-201ENST00000618799 583 ntBASIC20.63■□□□□ 0.89
MBD3O95983 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms