Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 RN7SL204P-201ENST00000582831 262 ntBASIC26.8■■□□□ 1.88
RAPGEF3O95398 REXO1L3P-201ENST00000622202 1288 ntBASIC26.8■■□□□ 1.88
RAPGEF3O95398 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF3O95398 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RAPGEF3O95398 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.8■■□□□ 1.88
RAPGEF3O95398 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RAPGEF3O95398 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RAPGEF3O95398 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 AC023141.13-201ENST00000604991 943 ntBASIC26.79■■□□□ 1.88
RAPGEF3O95398 AC005082.1-201ENST00000413042 2259 ntBASIC26.79■■□□□ 1.88
RAPGEF3O95398 GID4-202ENST00000376345 1391 ntTSL 3 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RAPGEF3O95398 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC26.79■■□□□ 1.88
RAPGEF3O95398 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RAPGEF3O95398 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RAPGEF3O95398 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RAPGEF3O95398 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RAPGEF3O95398 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RAPGEF3O95398 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RAPGEF3O95398 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC26.78■■□□□ 1.88
RAPGEF3O95398 PTCHD3P3-201ENST00000403073 906 ntBASIC26.78■■□□□ 1.88
RAPGEF3O95398 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC26.78■■□□□ 1.88
RAPGEF3O95398 GAPDHP21-201ENST00000450301 1010 ntBASIC26.78■■□□□ 1.88
RAPGEF3O95398 INGX-202ENST00000489074 768 ntBASIC26.78■■□□□ 1.88
RAPGEF3O95398 MEIS3P1-201ENST00000495167 958 ntBASIC26.78■■□□□ 1.88
RAPGEF3O95398 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC26.78■■□□□ 1.88
RAPGEF3O95398 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC26.78■■□□□ 1.88
RAPGEF3O95398 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC26.78■■□□□ 1.88
RAPGEF3O95398 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC26.78■■□□□ 1.88
RAPGEF3O95398 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RAPGEF3O95398 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
RAPGEF3O95398 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
RAPGEF3O95398 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RAPGEF3O95398 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RAPGEF3O95398 AL049812.1-201ENST00000432563 2267 ntBASIC26.77■■□□□ 1.88
RAPGEF3O95398 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RAPGEF3O95398 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RAPGEF3O95398 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RAPGEF3O95398 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RAPGEF3O95398 AL049757.1-201ENST00000616842 1596 ntBASIC26.77■■□□□ 1.88
RAPGEF3O95398 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RAPGEF3O95398 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RAPGEF3O95398 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.77■■□□□ 1.88
RAPGEF3O95398 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
RAPGEF3O95398 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RAPGEF3O95398 AC092919.2-201ENST00000623631 1645 ntBASIC26.76■■□□□ 1.87
RAPGEF3O95398 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RAPGEF3O95398 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RAPGEF3O95398 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RAPGEF3O95398 REM2-202ENST00000536884 1331 ntTSL 2 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RAPGEF3O95398 UGT1A2P-201ENST00000454886 866 ntBASIC26.76■■□□□ 1.87
RAPGEF3O95398 OARD1-208ENST00000469104 704 ntTSL 2 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RAPGEF3O95398 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC26.76■■□□□ 1.87
RAPGEF3O95398 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RAPGEF3O95398 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RAPGEF3O95398 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
RAPGEF3O95398 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC26.75■■□□□ 1.87
RAPGEF3O95398 ADH5P3-201ENST00000433842 1137 ntBASIC26.75■■□□□ 1.87
RAPGEF3O95398 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC26.75■■□□□ 1.87
RAPGEF3O95398 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
RAPGEF3O95398 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC26.75■■□□□ 1.87
RAPGEF3O95398 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC26.75■■□□□ 1.87
RAPGEF3O95398 YTHDF3-AS1-201ENST00000603538 718 ntBASIC26.75■■□□□ 1.87
RAPGEF3O95398 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC26.75■■□□□ 1.87
RAPGEF3O95398 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RAPGEF3O95398 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC26.75■■□□□ 1.87
RAPGEF3O95398 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC26.75■■□□□ 1.87
RAPGEF3O95398 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms