Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 KRT18P65-201ENST00000439811 1286 ntBASIC17.32■□□□□ 0.36
PRAMEF4O60810 AP003733.1-201ENST00000491725 852 ntBASIC17.32■□□□□ 0.36
PRAMEF4O60810 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.32■□□□□ 0.36
PRAMEF4O60810 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF4O60810 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.31■□□□□ 0.36
PRAMEF4O60810 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 ZNF444P1-201ENST00000559497 298 ntBASIC17.31■□□□□ 0.36
PRAMEF4O60810 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 AC005332.3-201ENST00000589904 676 ntBASIC17.31■□□□□ 0.36
PRAMEF4O60810 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF4O60810 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PRAMEF4O60810 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.3■□□□□ 0.36
PRAMEF4O60810 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF4O60810 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.3■□□□□ 0.36
PRAMEF4O60810 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF4O60810 AL353692.3-201ENST00000407031 1396 ntBASIC17.3■□□□□ 0.36
PRAMEF4O60810 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF4O60810 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PRAMEF4O60810 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF4O60810 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF4O60810 AL671277.2-201ENST00000458060 996 ntBASIC17.3■□□□□ 0.36
PRAMEF4O60810 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.3■□□□□ 0.36
PRAMEF4O60810 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.3■□□□□ 0.36
PRAMEF4O60810 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.3■□□□□ 0.36
PRAMEF4O60810 AL390719.2-201ENST00000606993 987 ntBASIC17.3■□□□□ 0.36
PRAMEF4O60810 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF4O60810 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF4O60810 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF4O60810 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRAMEF4O60810 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 PP12613-201ENST00000424958 2230 ntBASIC17.29■□□□□ 0.36
PRAMEF4O60810 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 GPR32P1-201ENST00000601788 811 ntBASIC17.29■□□□□ 0.36
PRAMEF4O60810 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.29■□□□□ 0.36
PRAMEF4O60810 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRAMEF4O60810 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PRAMEF4O60810 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms