Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNQ3O43525 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNQ3O43525 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC23■■□□□ 1.27
KCNQ3O43525 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNQ3O43525 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23■■□□□ 1.27
KCNQ3O43525 BX323043.1-201ENST00000641006 1765 ntBASIC23■■□□□ 1.27
KCNQ3O43525 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC23■■□□□ 1.27
KCNQ3O43525 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23■■□□□ 1.27
KCNQ3O43525 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23■■□□□ 1.27
KCNQ3O43525 MTDHP4-201ENST00000600287 670 ntBASIC23■■□□□ 1.27
KCNQ3O43525 AD001527.2-201ENST00000622994 785 ntBASIC23■■□□□ 1.27
KCNQ3O43525 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
KCNQ3O43525 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23■■□□□ 1.27
KCNQ3O43525 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNQ3O43525 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNQ3O43525 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
KCNQ3O43525 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
KCNQ3O43525 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
KCNQ3O43525 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 SIRPAP1-201ENST00000448467 1770 ntBASIC22.99■■□□□ 1.27
KCNQ3O43525 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.99■■□□□ 1.27
KCNQ3O43525 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.99■■□□□ 1.27
KCNQ3O43525 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
KCNQ3O43525 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 AC093909.1-201ENST00000504731 1122 ntBASIC22.99■■□□□ 1.27
KCNQ3O43525 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 AC006538.3-201ENST00000612495 578 ntBASIC22.99■■□□□ 1.27
KCNQ3O43525 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNQ3O43525 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.99■■□□□ 1.27
KCNQ3O43525 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
KCNQ3O43525 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.98■■□□□ 1.27
KCNQ3O43525 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNQ3O43525 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNQ3O43525 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.98■■□□□ 1.27
KCNQ3O43525 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNQ3O43525 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
KCNQ3O43525 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.98■■□□□ 1.27
KCNQ3O43525 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.98■■□□□ 1.27
KCNQ3O43525 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.98■■□□□ 1.27
KCNQ3O43525 MIR940-201ENST00000401276 94 ntBASIC22.98■■□□□ 1.27
KCNQ3O43525 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.98■■□□□ 1.27
KCNQ3O43525 AC092910.1-201ENST00000482027 1129 ntBASIC22.98■■□□□ 1.27
KCNQ3O43525 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.98■■□□□ 1.27
KCNQ3O43525 OR7E14P-202ENST00000530490 1290 ntBASIC22.98■■□□□ 1.27
KCNQ3O43525 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
KCNQ3O43525 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNQ3O43525 AC104581.1-202ENST00000635932 2618 ntBASIC22.98■■□□□ 1.27
KCNQ3O43525 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNQ3O43525 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.98■■□□□ 1.27
KCNQ3O43525 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
KCNQ3O43525 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.98■■□□□ 1.27
KCNQ3O43525 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNQ3O43525 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNQ3O43525 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNQ3O43525 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.98■■□□□ 1.27
KCNQ3O43525 AP002414.3-201ENST00000589352 1468 ntBASIC22.98■■□□□ 1.27
KCNQ3O43525 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNQ3O43525 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.97■■□□□ 1.27
KCNQ3O43525 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
KCNQ3O43525 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.97■■□□□ 1.27
KCNQ3O43525 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.97■■□□□ 1.27
KCNQ3O43525 PMS2P1-201ENST00000431037 1228 ntBASIC22.97■■□□□ 1.27
KCNQ3O43525 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.97■■□□□ 1.27
KCNQ3O43525 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
KCNQ3O43525 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.97■■□□□ 1.27
KCNQ3O43525 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.97■■□□□ 1.27
KCNQ3O43525 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.97■■□□□ 1.27
KCNQ3O43525 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.97■■□□□ 1.27
KCNQ3O43525 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
KCNQ3O43525 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
KCNQ3O43525 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
KCNQ3O43525 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
KCNQ3O43525 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.97■■□□□ 1.27
KCNQ3O43525 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
KCNQ3O43525 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.96■■□□□ 1.27
KCNQ3O43525 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
KCNQ3O43525 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.96■■□□□ 1.27
KCNQ3O43525 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
KCNQ3O43525 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
KCNQ3O43525 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.96■■□□□ 1.27
KCNQ3O43525 AC098831.1-202ENST00000438821 336 ntBASIC22.96■■□□□ 1.27
KCNQ3O43525 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.96■■□□□ 1.27
KCNQ3O43525 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms