Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL157888.1-201ENST00000631930 593 ntBASIC17.48■□□□□ 0.39
UBFD1O14562 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.48■□□□□ 0.39
UBFD1O14562 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.48■□□□□ 0.39
UBFD1O14562 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.48■□□□□ 0.39
UBFD1O14562 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBFD1O14562 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBFD1O14562 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
UBFD1O14562 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 AL023806.1-201ENST00000603994 1649 ntBASIC17.47■□□□□ 0.39
UBFD1O14562 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBFD1O14562 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 NEK4P2-201ENST00000580004 1012 ntBASIC17.47■□□□□ 0.39
UBFD1O14562 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
UBFD1O14562 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.47■□□□□ 0.39
UBFD1O14562 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
UBFD1O14562 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.47■□□□□ 0.39
UBFD1O14562 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.47■□□□□ 0.39
UBFD1O14562 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
UBFD1O14562 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
UBFD1O14562 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UBFD1O14562 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBFD1O14562 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
UBFD1O14562 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.46■□□□□ 0.39
UBFD1O14562 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.46■□□□□ 0.39
UBFD1O14562 LINC00304-203ENST00000565008 1864 ntBASIC17.46■□□□□ 0.39
UBFD1O14562 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.46■□□□□ 0.39
UBFD1O14562 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
UBFD1O14562 MMP23A-201ENST00000234610 1017 ntBASIC17.46■□□□□ 0.39
UBFD1O14562 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.46■□□□□ 0.39
UBFD1O14562 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.46■□□□□ 0.39
UBFD1O14562 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.46■□□□□ 0.39
UBFD1O14562 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.46■□□□□ 0.39
UBFD1O14562 PVRIG2P-201ENST00000435460 978 ntBASIC17.46■□□□□ 0.39
UBFD1O14562 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UBFD1O14562 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.46■□□□□ 0.39
UBFD1O14562 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.46■□□□□ 0.39
UBFD1O14562 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.46■□□□□ 0.39
UBFD1O14562 CROCCP2-202ENST00000412962 2773 ntBASIC17.46■□□□□ 0.39
UBFD1O14562 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UBFD1O14562 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.46■□□□□ 0.39
UBFD1O14562 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBFD1O14562 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.46■□□□□ 0.38
UBFD1O14562 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBFD1O14562 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
UBFD1O14562 AL138688.1-201ENST00000624851 1594 ntBASIC17.45■□□□□ 0.38
UBFD1O14562 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBFD1O14562 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.45■□□□□ 0.38
UBFD1O14562 HMGA1P5-201ENST00000412453 271 ntBASIC17.45■□□□□ 0.38
UBFD1O14562 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.45■□□□□ 0.38
UBFD1O14562 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.45■□□□□ 0.38
UBFD1O14562 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.45■□□□□ 0.38
UBFD1O14562 AC092865.7-201ENST00000641832 219 ntBASIC17.45■□□□□ 0.38
UBFD1O14562 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms