Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 BX088651.1-201ENST00000540551 451 ntBASIC19.14■□□□□ 0.65
RCCD1A6NED2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 AC009065.1-201ENST00000564055 1225 ntBASIC19.14■□□□□ 0.65
RCCD1A6NED2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RCCD1A6NED2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCCD1A6NED2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCCD1A6NED2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCCD1A6NED2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RCCD1A6NED2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RCCD1A6NED2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.14■□□□□ 0.65
RCCD1A6NED2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 AP001412.1-201ENST00000608405 714 ntBASIC19.13■□□□□ 0.65
RCCD1A6NED2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 AC009949.1-201ENST00000623048 1830 ntBASIC19.13■□□□□ 0.65
RCCD1A6NED2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
RCCD1A6NED2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RCCD1A6NED2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RCCD1A6NED2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RCCD1A6NED2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
RCCD1A6NED2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RCCD1A6NED2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.12■□□□□ 0.65
RCCD1A6NED2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.12■□□□□ 0.65
RCCD1A6NED2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.12■□□□□ 0.65
RCCD1A6NED2 FITM1-202ENST00000559294 800 ntBASIC19.12■□□□□ 0.65
RCCD1A6NED2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.12■□□□□ 0.65
RCCD1A6NED2 TMEM191A-211ENST00000637163 1067 ntBASIC19.12■□□□□ 0.65
RCCD1A6NED2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.12■□□□□ 0.65
RCCD1A6NED2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RCCD1A6NED2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RCCD1A6NED2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
RCCD1A6NED2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 HLA-J-201ENST00000462773 1622 ntBASIC19.11■□□□□ 0.65
RCCD1A6NED2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 UNC93B2-201ENST00000285383 730 ntBASIC19.11■□□□□ 0.65
RCCD1A6NED2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 AC024243.1-201ENST00000609234 778 ntBASIC19.11■□□□□ 0.65
RCCD1A6NED2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.11■□□□□ 0.65
RCCD1A6NED2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RCCD1A6NED2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms