Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.65■□□□□ 0.26
HRH3Q9Y5N1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HRH3Q9Y5N1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.64■□□□□ 0.25
HRH3Q9Y5N1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 TSPY22P-201ENST00000427496 604 ntBASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 AL390719.2-201ENST00000606993 987 ntBASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HRH3Q9Y5N1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.62■□□□□ 0.25
HRH3Q9Y5N1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms