Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RCL1Q9Y2P8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 AC093010.1-201ENST00000473625 1624 ntBASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RCL1Q9Y2P8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 PCDH8P1-201ENST00000428983 2773 ntBASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 CROCCP5-201ENST00000436658 830 ntBASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 AC083880.1-201ENST00000608266 535 ntBASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 CROCCP2-202ENST00000412962 2773 ntBASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 AL138688.1-201ENST00000624851 1594 ntBASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RCL1Q9Y2P8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 KRT8P50-201ENST00000562022 1438 ntBASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 AC026185.1-201ENST00000445748 174 ntBASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RCL1Q9Y2P8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms