Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 URGCP-206ENST00000446958 365 ntTSL 2 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 AC004967.1-201ENST00000453589 447 ntBASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CDK11AQ9UQ88 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 MED29-202ENST00000594368 1471 ntTSL 2 BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 COA5-202ENST00000409997 557 ntTSL 4 BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 AC136632.2-201ENST00000512891 861 ntBASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CDK11AQ9UQ88 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.03
CDK11AQ9UQ88 AC116562.4-201ENST00000641316 2276 ntBASIC27.7■■■□□ 2.03
CDK11AQ9UQ88 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 SLC4A1APP2-201ENST00000424054 1259 ntBASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 MTDHP5-201ENST00000598980 586 ntBASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 AL589182.2-201ENST00000619332 1049 ntBASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC27.7■■■□□ 2.02
CDK11AQ9UQ88 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC27.69■■■□□ 2.02
CDK11AQ9UQ88 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 AC093010.1-201ENST00000473625 1624 ntBASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 COX5BP2-201ENST00000392354 334 ntBASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 PMS2P2-201ENST00000425039 1128 ntBASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 PON3-205ENST00000451904 1053 ntTSL 3 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 AC108751.1-201ENST00000490852 363 ntBASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 AC064836.3-201ENST00000607928 673 ntBASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 KRT8P47-201ENST00000604727 1398 ntBASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC27.68■■■□□ 2.02
CDK11AQ9UQ88 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms